RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SLC33A1O00400 549 aaPredicted RBP13.65□□□□□ -0.22
HMGN4-201ENST00000377575 SLC34A1Q06495 639 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 DYNC1I2Q13409 638 aaKnown RBP13.65□□□□□ -0.22
HMGN4-201ENST00000377575 RIPK1Q13546 671 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 IL13RA2Q14627 380 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 Q499Y3 187 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 PRR31Q5SQ13 230 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 ASPHD2Q6ICH7 369 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 Q6P435 159 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 BRICD5Q6PL45 260 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 LIAT1Q6ZQX7 453 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 Q6ZSV7 163 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 ZNF485Q8NCK3 441 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 BPIFB6Q8NFQ5 453 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 LINC01006Q8NI28 216 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 TFAP2CQ92754 450 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 CLEC7AQ9BXN2 247 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 C16orf95Q9H693 158 aa13.65□□□□□ -0.22
HMGN4-201ENST00000377575 IGHV2-26A0A0B4J1V2 119 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 TRBV5-5A0A0J9YX44 114 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 FAM90A8PA6NJQ4 464 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 H0YJX3 145 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 TSPAN9O75954 239 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 BDKRB2P30411 391 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 ZNF93P35789 620 aaPredicted RBP13.64□□□□□ -0.23
HMGN4-201ENST00000377575 WNT4P56705 351 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 GABPB1Q06547 395 aaPredicted RBP13.64□□□□□ -0.23
HMGN4-201ENST00000377575 AESQ08117 197 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 ATXN7L3Q14CW9 347 aaPredicted RBP13.64□□□□□ -0.23
HMGN4-201ENST00000377575 LY6EQ16553 131 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 KRBOX4Q5JUW0 171 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 OR52W1Q6IF63 320 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 LAIR2Q6ISS4 152 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 LHFPL4Q7Z7J7 247 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 ZFP41Q8N8Y5 198 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 OR51T1Q8NGJ9 327 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 OR13C5Q8NGS8 318 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 MALSU1Q96EH3 234 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 PGLYRP3Q96LB9 341 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 NR1H4Q96RI1 486 aaPredicted RBP13.64□□□□□ -0.23
HMGN4-201ENST00000377575 S100A13Q99584 98 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 TMEM133Q9H2Q1 129 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 ABCB10Q9NRK6 738 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 PAK1IP1Q9NWT1 392 aaPredicted RBP13.64□□□□□ -0.23
HMGN4-201ENST00000377575 TAS2R3Q9NYW6 316 aa13.64□□□□□ -0.23
HMGN4-201ENST00000377575 ODAMA1E959 279 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 VGLL3A8MV65 326 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 FSTP19883 344 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 PTGFRP43088 359 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 OR3A4PP47883 348 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 GLIPR1P48060 266 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 PAN3Q58A45 887 aaKnown RBP13.63□□□□□ -0.23
HMGN4-201ENST00000377575 MINOS1Q5TGZ0 78 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 THRSPQ92748 146 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 CORO2AQ92828 525 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 METTL9Q9H1A3 318 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 IL36GQ9NZH8 169 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 OR6C3Q9NZP0 311 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 NKX1-2Q9UD57 310 aaPredicted RBP13.63□□□□□ -0.23
HMGN4-201ENST00000377575 ERGIC3Q9Y282 383 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 MINOS1-NBL1R4GNA1 71 aa13.63□□□□□ -0.23
HMGN4-201ENST00000377575 PNMA8CA0A1B0GUJ8 204 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 HSPB6O14558 160 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 HTR3BO95264 441 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 CSTBP04080 98 aaKnown RBP13.62□□□□□ -0.23
HMGN4-201ENST00000377575 IGFBP3P17936 291 aaPredicted RBP13.62□□□□□ -0.23
HMGN4-201ENST00000377575 PAX6P26367 422 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 C21orf33P30042 268 aaPredicted RBP13.62□□□□□ -0.23
HMGN4-201ENST00000377575 KCNJ3P48549 501 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 PROK1P58294 105 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 FAM189A2Q15884 450 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 PLA1AQ53H76 456 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 PRAMEF5Q5TYX0 476 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 HEPN1Q6WQI6 88 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 ASCL4Q6XD76 172 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 RTN4RL2Q86UN3 420 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 Q8NFD4 153 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 OR4C13Q8NGP0 309 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 OR10K1Q8NGX5 313 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 NDNFQ8TB73 568 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 COQ2Q96H96 371 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 ZNF184Q99676 751 aaPredicted RBP13.62□□□□□ -0.23
HMGN4-201ENST00000377575 CITED1Q99966 193 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 RANBP3Q9H6Z4 567 aaPredicted RBP13.62□□□□□ -0.23
HMGN4-201ENST00000377575 PCDHB16Q9NRJ7 776 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 FKBP14Q9NWM8 211 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 ING3Q9NXR8 418 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 TRRAPQ9Y4A5 3859 aa13.62□□□□□ -0.23
HMGN4-201ENST00000377575 ZNF729A6NN14 1252 aaPredicted RBP13.61□□□□□ -0.23
HMGN4-201ENST00000377575 ZNF780AO75290 641 aaPredicted RBP13.61□□□□□ -0.23
HMGN4-201ENST00000377575 GPX5O75715 221 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 CDRT1O95170 752 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 CD1AP06126 327 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 CELP19835 753 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 CDK2P24941 298 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 MAPK3P27361 379 aaPredicted RBP13.61□□□□□ -0.23
HMGN4-201ENST00000377575 GABRA5P31644 462 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 AQP4P55087 323 aa13.61□□□□□ -0.23
HMGN4-201ENST00000377575 RPS11P62280 158 aaKnown RBP eCLIP13.61□□□□□ -0.23
HMGN4-201ENST00000377575 BDH1Q02338 343 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms