RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 BMP5P22003 454 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 LYPD8Q6UX82 237 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TMEM18Q96B42 140 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 CHST5Q9GZS9 411 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 UQCC1Q9NVA1 299 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 A0A1W2PPC1 479 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ERVFC1-1P60608 527 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 HES3Q5TGS1 186 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 CTHRC1Q96CG8 243 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 BRWD1Q9NSI6 2320 aa16.45■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TRBV5-5A0A0J9YX44 114 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 LY86O95711 162 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TTRP02766 147 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TMEM33P57088 247 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TMEM267Q0VDI3 215 aaPredicted RBP16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 BCL2L2Q92843 193 aaPredicted RBP16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 CDX2Q99626 313 aaPredicted RBP16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TMEM38BQ9NVV0 291 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 LYZL6O75951 148 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 FSTP19883 344 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 COL19A1Q14993 1142 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TUSC5Q8IXB3 177 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 LYG1Q8N1E2 194 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 DEFB124Q8NES8 71 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 CA5BP1Q8WTZ4 195 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ALX4Q9H161 411 aaPredicted RBP16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 GPR35Q9HC97 309 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 CKAP5Q14008 2032 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ZNF236Q9UL36 1845 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 C21orf140B9A014 251 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 GEMIN2O14893 280 aaKnown RBP16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ZNF429Q86V71 674 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 SF3B6Q9Y3B4 125 aaKnown RBP16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 SUMO1P63165 101 aaKnown RBP16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 GLRX2Q9NS18 164 aa16.44■□□□□ 0.22
CNTNAP3B-203ENST00000377561 PPIHO43447 177 aaKnown RBP16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 PTTG1IPP53801 180 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 RNF151Q2KHN1 245 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 CACNG5Q9UF02 275 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 MRPS18BQ9Y676 258 aaKnown RBP16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 FAM90A27PA6NNH2 459 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 MNX1P50219 401 aaPredicted RBP16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ZNF528Q3MIS6 628 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TCAPO15273 167 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 FCGR3BO75015 233 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ACTL6AO96019 429 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 FAM3AP98173 230 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 PAX5Q02548 391 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 FZR1Q9UM11 496 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 SLC38A11Q08AI6 406 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TMEM108Q6UXF1 575 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 C11orf42Q8N5U0 333 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TOLLIPQ9H0E2 274 aa16.43■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TRDCB7Z8K6 153 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 IGF2P01344 180 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 OPRK1P41145 380 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TRIP6Q15654 476 aaKnown RBP16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 R4GN57 208 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 HLA-DQB1P01920 261 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 WSB1Q9Y6I7 421 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 LCTP09848 1927 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 PSME4Q14997 1843 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 DEFB108AA8MXU0 73 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 MAGEA5P43359 124 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ROM1Q03395 351 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ETFRF1Q6IPR1 90 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 RFESDQ8TAC1 157 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 CCL17Q92583 94 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 MISP3Q96FF7 219 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TMEM147Q9BVK8 224 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 PRR13Q9NZ81 148 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ARID1AO14497 2285 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 RAB7AP51149 207 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 LIAT1Q6ZQX7 453 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 OR4F17Q8NGA8 305 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 WDR61Q9GZS3 305 aaKnown RBP16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 GHITMQ9H3K2 345 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 PSG11Q9UQ72 335 aa16.42■□□□□ 0.22
CNTNAP3B-203ENST00000377561 PIKFYVEQ9Y2I7 2098 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 LOC102723971A0A1B0GUV8 181 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 LINC00862A6NCI5 91 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 SLC35B3Q9H1N7 401 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ESRP2Q9H6T0 727 aaKnown RBP16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 RAB5AP20339 215 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 P2RY1P47900 373 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ABHD3Q8WU67 409 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 CCDC88CQ9P219 2028 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 POMT1Q9Y6A1 747 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 TBC1D26Q86UD7 250 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 ZNF385AQ96PM9 386 aaKnown RBP16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 CXXC4Q9H2H0 198 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 GAL3ST2Q9H3Q3 398 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 MEOX2P50222 304 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 FOXL2P58012 376 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 C19orf57Q0VDD7 668 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 Q1RN00 199 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 OR2M7Q8NG81 312 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 LRRC29Q8WV35 223 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 GPR137Q96N19 417 aa16.41■□□□□ 0.22
CNTNAP3B-203ENST00000377561 GPR27Q9NS67 375 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms