RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 HIPK2Q9H2X6 1198 aa7.31□□□□□ -1.24
CRNKL1-202ENST00000377340 Q9UFV3 132 aa7.31□□□□□ -1.24
CRNKL1-202ENST00000377340 ZNF716A6NP11 495 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 ERVH48-1M5A8F1 160 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 XRCC3O43542 346 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 TMEM11P17152 192 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 PTGDSP41222 190 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 GABRA6Q16445 453 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 FNDC7Q5VTL7 733 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 OR5T1Q8NG75 326 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 C7orf50Q9BRJ6 194 aaKnown RBP7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 SCPEP1Q9HB40 452 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 FLVCR2Q9UPI3 526 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 WIPI2Q9Y4P8 454 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 HILPDAQ9Y5L2 63 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 IGHV1-69-2A0A0G2JMI3 117 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 B9A039 149 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 CLPSP04118 112 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 ENDOGQ14249 297 aaKnown RBP7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 CTF1Q16619 201 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 TMEM268Q5VZI3 342 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 GGNQ86UU5 652 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 SLC25A21Q9BQT8 299 aaPredicted RBP7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 SOX7Q9BT81 388 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 RNF122Q9H9V4 155 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 BARX1Q9HBU1 254 aaPredicted RBP7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 MRPS18CQ9Y3D5 142 aaKnown RBP7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 IGHV2OR16-5A0A0B4J2B6 119 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 A8MXE2 369 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 GPR137BO60478 399 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 FBXO24O75426 580 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 PDGFAP04085 211 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 PRRX1P54821 245 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 GFRA1P56159 465 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 SORDQ00796 357 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 MSI2Q96DH6 328 aaKnown RBP7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 STARD4Q96DR4 205 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 WFIKKN1Q96NZ8 548 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 LINC00470Q9BZP3 86 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 MFFQ9GZY8 342 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 MAGT1Q9H0U3 335 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 HEXA-AS1Q9H8Q6 139 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 TREM1Q9NP99 234 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 ZFP57Q9NU63 452 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 PPP1R14DQ9NXH3 145 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 DENND4CQ5VZ89 1909 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 PKD1L2Q7Z442 2459 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 F2RL2O00254 374 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 SPDEFO95238 335 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 RAB13P51153 203 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 RPP30P78346 268 aaKnown RBP7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 COL10A1Q03692 680 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 SSUH2Q9Y2M2 353 aa7.3□□□□□ -1.24
CRNKL1-202ENST00000377340 PROB1E7EW31 1015 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 NPIPB7O75200 414 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 TGFAP01135 160 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 APELAP0DMC3 54 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 CEACAM21Q3KPI0 293 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 SLC25A53Q5H9E4 307 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 UPRTQ96BW1 309 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 OR2D2Q9H210 308 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 POFUT1Q9H488 388 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 ZDHHC11Q9H8X9 412 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 DLL4Q9NR61 685 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 MTORP42345 2549 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 ALPK3Q96L96 1907 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 NUDT19A8MXV4 375 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 PRAF2O60831 178 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 MRPS11P82912 194 aaKnown RBP7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 FAM3AP98173 230 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 PSG7Q13046 419 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 SPANXN5Q5MJ07 72 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 C10orf128Q5T292 105 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 NHLRC1Q6VVB1 395 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 STOML3Q8TAV4 291 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 TMEM45BQ96B21 275 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 HDHD3Q9BSH5 251 aaPredicted RBP7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 ZDHHC8Q9ULC8 765 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 IGLV3-32A0A0A0MS00 114 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 A0A0U1RQV5 110 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 H3BP45 60 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 J3QKU1 62 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 CTAG2O75638 210 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 IFNA2P01563 188 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 VSIG8P0DPA2 414 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 HNF1AP20823 631 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 TIMP3P35625 211 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 CEACAM3P40198 252 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 UQCRFS1P47985 274 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 AKR1C8PQ5T2L2 129 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 TMEM104Q8NE00 496 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 OR4C16Q8NGL9 310 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 TMEM54Q969K7 222 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 ZNF426Q9BUY5 554 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 NPTNQ9Y639 398 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 PLXND1Q9Y4D7 1925 aa7.29□□□□□ -1.24
CRNKL1-202ENST00000377340 WNT9BO14905 357 aa7.28□□□□□ -1.24
CRNKL1-202ENST00000377340 AGPAT2O15120 278 aa7.28□□□□□ -1.24
CRNKL1-202ENST00000377340 RP2O75695 350 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms