RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 MS4A7Q9GZW8 240 aaPredicted RBP11.96□□□□□ -0.49
UBE4B-203ENST00000377153 SIRPDQ9H106 197 aa11.96□□□□□ -0.49
UBE4B-203ENST00000377153 PPIL3Q9H2H8 161 aaKnown RBP11.96□□□□□ -0.49
UBE4B-203ENST00000377153 OCEL1Q9H607 264 aa11.96□□□□□ -0.49
UBE4B-203ENST00000377153 METTL8Q9H825 291 aaKnown RBP11.96□□□□□ -0.49
UBE4B-203ENST00000377153 SPACA1Q9HBV2 294 aa11.96□□□□□ -0.49
UBE4B-203ENST00000377153 NF1P21359 2839 aa11.96□□□□□ -0.5
UBE4B-203ENST00000377153 NIPBLQ6KC79 2804 aaeCLIP11.95□□□□□ -0.5
UBE4B-203ENST00000377153 TRAV1-2A0A0B4J238 106 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 BPNT1O95861 308 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 FSHBP01225 129 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 CD36P16671 472 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 LMO1P25800 156 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 KCNJ3P48549 501 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 P2RX3P56373 397 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 GUCA2AQ02747 115 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 ATXN7L3Q14CW9 347 aaPredicted RBP11.95□□□□□ -0.5
UBE4B-203ENST00000377153 RAB11BQ15907 218 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 C1orf100Q5SVJ3 147 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 ATAD3CQ5T2N8 411 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 OR4S1Q8NGB4 309 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 NEK7Q8TDX7 302 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 FAM46BQ96A09 425 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 TMEM59Q9BXS4 323 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 SELENOIQ9C0D9 397 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 AK6Q9Y3D8 172 aaKnown RBP11.95□□□□□ -0.5
UBE4B-203ENST00000377153 V9GY05 133 aa11.95□□□□□ -0.5
UBE4B-203ENST00000377153 TRGV10A0A0A0MS01 117 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 A0A0G2JK05 382 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 LOC100506127A0A0U1RQW1 187 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A10PA6NDY2 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A18PA6NE21 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A16PA6NEW6 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A20PA6NIJ5 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A8PA6NJQ4 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A7PA6NKC0 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A22PA8MWA6 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A12PA8MX19 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A5PA8MXJ8 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A23PA8MXZ1 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 SLC17A2O00624 439 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 GEMIN2O14893 280 aaKnown RBP11.94□□□□□ -0.5
UBE4B-203ENST00000377153 SLC22A1O15245 554 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A15PP0C7V4 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A13PP0C7W8 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A14PP0C7W9 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FAM90A24PP0C7X0 464 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 ARSBP15848 533 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 RAB3BP20337 219 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 ERP29P30040 261 aaKnown RBP11.94□□□□□ -0.5
UBE4B-203ENST00000377153 FGF9P31371 208 aaPredicted RBP11.94□□□□□ -0.5
UBE4B-203ENST00000377153 BPIFB3P59826 476 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 KRBOX4Q5JUW0 171 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 Q6P435 159 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 RBMS3Q6XE24 437 aaKnown RBP11.94□□□□□ -0.5
UBE4B-203ENST00000377153 C1orf122Q6ZSJ8 110 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 LYPD6Q86Y78 171 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 KCNG3Q8TAE7 436 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 ZNF418Q8TF45 676 aaPredicted RBP11.94□□□□□ -0.5
UBE4B-203ENST00000377153 LHX4Q969G2 390 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 KCTD7Q96MP8 289 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 ZNF714Q96N38 554 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 TBX15Q96SF7 602 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 CHCHD6Q9BRQ6 235 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 BARHL1Q9BZE3 327 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 GAL3ST2Q9H3Q3 398 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 BANF2Q9H503 90 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 IFT22Q9H7X7 185 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 SIRT7Q9NRC8 400 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 TXNL4BQ9NX01 149 aaKnown RBP11.94□□□□□ -0.5
UBE4B-203ENST00000377153 LINC00312Q9Y6C7 94 aa11.94□□□□□ -0.5
UBE4B-203ENST00000377153 IGHV3OR16-10A0A075B7F0 116 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 A0A1W2PP11 408 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 MPIG6BO95866 241 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 IGHV4-38-2P0DP08 117 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 MMP9P14780 707 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 RBM39Q14498 530 aaKnown RBP11.93□□□□□ -0.5
UBE4B-203ENST00000377153 ZNF273Q14593 569 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 TAF9Q16594 264 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 TMEM200BQ69YZ2 307 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 TPRA1Q86W33 373 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 TPRX1Q8N7U7 411 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 C1orf147Q96MC9 270 aaPredicted RBP11.93□□□□□ -0.5
UBE4B-203ENST00000377153 DPCDQ9BVM2 203 aaPredicted RBP11.93□□□□□ -0.5
UBE4B-203ENST00000377153 SUCNR1Q9BXA5 334 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 ING3Q9NXR8 418 aa11.93□□□□□ -0.5
UBE4B-203ENST00000377153 UBE2J1Q9Y385 318 aaPredicted RBP11.93□□□□□ -0.5
UBE4B-203ENST00000377153 TRAV24A0A0B4J272 114 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 ODAMA1E959 279 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 TCF21O43680 179 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 RBP4P02753 201 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 ZNF728P0DKX0 622 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 VSIG8P0DPA2 414 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 CCL3L1P16619 93 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 GADD45AP24522 165 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 ERVFRD-1P60508 538 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 AESQ08117 197 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 P2RY14Q15391 338 aa11.92□□□□□ -0.5
UBE4B-203ENST00000377153 KLF17Q5JT82 389 aaPredicted RBP11.92□□□□□ -0.5
UBE4B-203ENST00000377153 METAP1DQ6UB28 335 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms