RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 FOXJ3Q9UPW0 622 aa18.04■□□□□ 0.48
SRM-201ENST00000376957 HTR3BO95264 441 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 FSTP19883 344 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 MYF6P23409 242 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 OR3A1P47881 315 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 DOC2BQ14184 412 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 SPHARQ15513 63 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 KRBOX4Q5JUW0 171 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 SHISA2Q6UWI4 295 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 ZNF782Q6ZMW2 699 aaPredicted RBP18.03■□□□□ 0.48
SRM-201ENST00000376957 C11orf42Q8N5U0 333 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 ZNF565Q8N9K5 539 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 FOXRED1Q96CU9 486 aaPredicted RBP18.03■□□□□ 0.48
SRM-201ENST00000376957 OR14A2Q96R54 314 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 ZNF184Q99676 751 aaPredicted RBP18.03■□□□□ 0.48
SRM-201ENST00000376957 PPA2Q9H2U2 334 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 VPREB3Q9UKI3 123 aa18.03■□□□□ 0.48
SRM-201ENST00000376957 TBL2Q9Y4P3 447 aaKnown RBP18.03■□□□□ 0.48
SRM-201ENST00000376957 H3BUI4 141 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 ARG1P05089 322 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 KCNJ3P48549 501 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 DYNC1I2Q13409 638 aaKnown RBP18.02■□□□□ 0.48
SRM-201ENST00000376957 MED22Q15528 200 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 AANATQ16613 207 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 HCP5Q6MZN7 132 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 IZUMO2Q6UXV1 221 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 RNF144BQ7Z419 303 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 LINC00596Q86U02 117 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 CDH26Q8IXH8 852 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 TPRX1Q8N7U7 411 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 DTX3Q8N9I9 347 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 OR51T1Q8NGJ9 327 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 OR13C5Q8NGS8 318 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 TAS2R3Q9NYW6 316 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 IL36GQ9NZH8 169 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 OR6C3Q9NZP0 311 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 BLOC1S6Q9UL45 172 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 SESN1Q9Y6P5 492 aa18.02■□□□□ 0.48
SRM-201ENST00000376957 MEGF11A6BM72 1044 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 SLC33A1O00400 549 aaPredicted RBP18.01■□□□□ 0.47
SRM-201ENST00000376957 GPR137BO60478 399 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 CLPXO76031 633 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 NDUFA7O95182 113 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 GTF2F2P13984 249 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 IGFBP3P17936 291 aaPredicted RBP18.01■□□□□ 0.47
SRM-201ENST00000376957 OR3A4PP47883 348 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 RAG2P55895 527 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 DLX6P56179 175 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 AESQ08117 197 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 PAN3Q58A45 887 aaKnown RBP18.01■□□□□ 0.47
SRM-201ENST00000376957 DHRS7BQ6IAN0 325 aaPredicted RBP18.01■□□□□ 0.47
SRM-201ENST00000376957 Q6P435 159 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 CRIP3Q6Q6R5 217 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 ASCL4Q6XD76 172 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 OSR2Q8N2R0 312 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 JAGN1Q8N5M9 183 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 NKAIN3Q8N8D7 197 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 SSX3Q99909 188 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 ZNF747Q9BV97 191 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 MEGF9Q9H1U4 602 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 RAB18Q9NP72 206 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 ST3GAL6Q9Y274 331 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 MMP24Q9Y5R2 645 aa18.01■□□□□ 0.47
SRM-201ENST00000376957 RGS10O43665 173 aa18■□□□□ 0.47
SRM-201ENST00000376957 RPS11P62280 158 aaKnown RBP eCLIP18■□□□□ 0.47
SRM-201ENST00000376957 GPR50Q13585 617 aa18■□□□□ 0.47
SRM-201ENST00000376957 LRRC75BQ2VPJ9 315 aa18■□□□□ 0.47
SRM-201ENST00000376957 ASPHD2Q6ICH7 369 aa18■□□□□ 0.47
SRM-201ENST00000376957 Q8NFD4 153 aa18■□□□□ 0.47
SRM-201ENST00000376957 OR11H6Q8NGC7 330 aa18■□□□□ 0.47
SRM-201ENST00000376957 OR4D6Q8NGJ1 314 aa18■□□□□ 0.47
SRM-201ENST00000376957 SGMS2Q8NHU3 365 aa18■□□□□ 0.47
SRM-201ENST00000376957 CORO2AQ92828 525 aa18■□□□□ 0.47
SRM-201ENST00000376957 MALSU1Q96EH3 234 aa18■□□□□ 0.47
SRM-201ENST00000376957 TCF7L1Q9HCS4 588 aa18■□□□□ 0.47
SRM-201ENST00000376957 DNHD1Q96M86 4753 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 TRBV5-7A0A0A0MS05 114 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 ODAMA1E959 279 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 MEX3AA1L020 520 aaKnown RBP17.99■□□□□ 0.47
SRM-201ENST00000376957 CDRT1O95170 752 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 SERPINA2P20848 420 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 OMGP23515 440 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 SLC35A2P78381 396 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 OR10K1Q8NGX5 313 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 MRPS24Q96EL2 167 aaKnown RBP17.99■□□□□ 0.47
SRM-201ENST00000376957 DERL3Q96Q80 235 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 CCDC90BQ9GZT6 254 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 TMEM133Q9H2Q1 129 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 ABCB10Q9NRK6 738 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 C1RLQ9NZP8 487 aa17.99■□□□□ 0.47
SRM-201ENST00000376957 A0A1W2PPK0 400 aa17.98■□□□□ 0.47
SRM-201ENST00000376957 ZNF729A6NN14 1252 aaPredicted RBP17.98■□□□□ 0.47
SRM-201ENST00000376957 H3BUX3 64 aa17.98■□□□□ 0.47
SRM-201ENST00000376957 MAS1P04201 325 aa17.98■□□□□ 0.47
SRM-201ENST00000376957 GLIPR1P48060 266 aa17.98■□□□□ 0.47
SRM-201ENST00000376957 ATXN7L3Q14CW9 347 aaPredicted RBP17.98■□□□□ 0.47
SRM-201ENST00000376957 TAF9Q16594 264 aa17.98■□□□□ 0.47
SRM-201ENST00000376957 MPV17LQ2QL34 196 aa17.98■□□□□ 0.47
SRM-201ENST00000376957 SLC22A6Q4U2R8 563 aa17.98■□□□□ 0.47
SRM-201ENST00000376957 NHLRC3Q5JS37 347 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms