RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 HERPUD1Q15011 391 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 ALKBH6Q3KRA9 238 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 Q6ZT83 130 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 FOXRED2Q8IWF2 684 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 OR5T2Q8NGG2 359 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 OR2J1Q9GZK6 312 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 MEMO1Q9Y316 297 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 SVILO95425 2214 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 PRSS44E7EML9 344 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 LGALS8O00214 317 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 CEACAM4O75871 244 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 SNTB1Q13884 538 aaKnown RBP18.5■□□□□ 0.55
RNF39-202ENST00000376751 SUMF2Q8NBJ7 301 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 NEK7Q8TDX7 302 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 CDH20Q9HBT6 801 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 TUBD1Q9UJT1 453 aa18.5■□□□□ 0.55
RNF39-202ENST00000376751 ZFHX2Q9C0A1 2572 aaPredicted RBP18.49■□□□□ 0.55
RNF39-202ENST00000376751 ZP3P21754 424 aa18.49■□□□□ 0.55
RNF39-202ENST00000376751 HSD17B13Q7Z5P4 300 aaPredicted RBP18.49■□□□□ 0.55
RNF39-202ENST00000376751 FAM58AQ8N1B3 248 aa18.49■□□□□ 0.55
RNF39-202ENST00000376751 CNTNAP3BQ96NU0 1288 aa18.49■□□□□ 0.55
RNF39-202ENST00000376751 TAAR6Q96RI8 345 aa18.49■□□□□ 0.55
RNF39-202ENST00000376751 CNTNAP3Q9BZ76 1288 aa18.49■□□□□ 0.55
RNF39-202ENST00000376751 PKIBQ9C010 78 aa18.49■□□□□ 0.55
RNF39-202ENST00000376751 SHARPINQ9H0F6 387 aa18.49■□□□□ 0.55
RNF39-202ENST00000376751 INTS1Q8N201 2190 aaKnown RBP18.49■□□□□ 0.55
RNF39-202ENST00000376751 TRAV24A0A0B4J272 114 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 IGKV1-6A0A0C4DH72 117 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 J3QT63 122 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 TPD52L2O43399 206 aaKnown RBP18.48■□□□□ 0.55
RNF39-202ENST00000376751 PET100P0DJ07 73 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 SRSF7Q16629 238 aaKnown RBP eCLIP18.48■□□□□ 0.55
RNF39-202ENST00000376751 LYZL2Q7Z4W2 148 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 BVESQ8NE79 360 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 LHFPL5Q8TAF8 219 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 MSI2Q96DH6 328 aaKnown RBP18.48■□□□□ 0.55
RNF39-202ENST00000376751 PLSCR2Q9NRY7 297 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 KCNIP3Q9Y2W7 256 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 DSPP15924 2871 aaKnown RBP18.48■□□□□ 0.55
RNF39-202ENST00000376751 ZNF891A8MT65 544 aaPredicted RBP18.48■□□□□ 0.55
RNF39-202ENST00000376751 J3QW42 95 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 BET1O15155 118 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 IFNA21P01568 189 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 FOXF2Q12947 444 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 PAN3Q58A45 887 aaKnown RBP18.48■□□□□ 0.55
RNF39-202ENST00000376751 C20orf204Q6ZNR8 217 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 LIAT1Q6ZQX7 453 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 SLC25A40Q8TBP6 338 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 MRPL30Q8TCC3 161 aaKnown RBP18.48■□□□□ 0.55
RNF39-202ENST00000376751 GLYATL2Q8WU03 294 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 RDH5Q92781 318 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 C18orf12Q96KH6 178 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 SUCNR1Q9BXA5 334 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 SLC5A7Q9GZV3 580 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 DNAJB11Q9UBS4 358 aa18.48■□□□□ 0.55
RNF39-202ENST00000376751 TMA7Q9Y2S6 64 aaKnown RBP18.48■□□□□ 0.55
RNF39-202ENST00000376751 AKAP13Q12802 2813 aa18.47■□□□□ 0.55
RNF39-202ENST00000376751 NUP62P37198 522 aaPredicted RBP18.47■□□□□ 0.55
RNF39-202ENST00000376751 NOVA1P51513 510 aaKnown RBP18.47■□□□□ 0.55
RNF39-202ENST00000376751 ACSF3Q4G176 576 aaPredicted RBP18.47■□□□□ 0.55
RNF39-202ENST00000376751 LINC00596Q86U02 117 aa18.47■□□□□ 0.55
RNF39-202ENST00000376751 LRTM2Q8N967 370 aa18.47■□□□□ 0.55
RNF39-202ENST00000376751 WDR31Q8NA23 367 aa18.47■□□□□ 0.55
RNF39-202ENST00000376751 PLK3Q9H4B4 646 aa18.47■□□□□ 0.55
RNF39-202ENST00000376751 HS3ST1O14792 307 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 AGFG2O95081 481 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 TPT1P13693 172 aaKnown RBP18.46■□□□□ 0.55
RNF39-202ENST00000376751 COX5AP20674 150 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 IL13RA2Q14627 380 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 INO80CQ6PI98 192 aaPredicted RBP18.46■□□□□ 0.55
RNF39-202ENST00000376751 CCDC36Q8IYA8 594 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 WNT2BQ93097 391 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 SARAFQ96BY9 339 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 TP53RKQ96S44 253 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 RTL8AQ9BWD3 113 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 PRR33A8MZF0 331 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 TRDCB7Z8K6 153 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 H7C1Q1 480 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 HKR1P10072 659 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 GNRHRP30968 328 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 NAAAQ02083 359 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 MRPL49Q13405 166 aaKnown RBP18.46■□□□□ 0.55
RNF39-202ENST00000376751 OR2A2Q6IF42 318 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 ZNF585AQ6P3V2 769 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 BAP18Q8IXM2 172 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 EIF4E3Q8N5X7 224 aaKnown RBP18.46■□□□□ 0.55
RNF39-202ENST00000376751 SESN1Q9Y6P5 492 aa18.46■□□□□ 0.55
RNF39-202ENST00000376751 GTF3C1Q12789 2109 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 IGKV1D-13A0A0B4J2D9 117 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 PHF1O43189 567 aaPredicted RBP18.45■□□□□ 0.54
RNF39-202ENST00000376751 DEDDO75618 318 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 IGKV1-13P0DP09 117 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 MPV17P39210 176 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 KCNJ3P48549 501 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 Q6P435 159 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 CCDC71LQ8N9Z2 235 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 SPACA1Q9HBV2 294 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 DLL3Q9NYJ7 618 aa18.45■□□□□ 0.54
RNF39-202ENST00000376751 LSM5Q9Y4Y9 91 aaKnown RBP18.45■□□□□ 0.54
RNF39-202ENST00000376751 CEP250Q9BV73 2442 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms