RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CEACAM21Q3KPI0 293 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 LIAT1Q6ZQX7 453 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 WDR86Q86TI4 376 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 HIPK2Q9H2X6 1198 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF701Q9NV72 531 aaPredicted RBP8.21□□□□□ -1.1
TRIM39-202ENST00000376659 ASF1BQ9NVP2 202 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 BDP1A6H8Y1 2624 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 MED12LQ86YW9 2145 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 A0A1B0GV90 55 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 WRBO00258 174 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 ZNHIT1O43257 154 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 SPP1P10451 314 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 MPLP40238 635 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 MAGEA5P43359 124 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 CAV2P51636 162 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 FGF12P61328 243 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 RSU1Q15404 277 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 MAJINQ3KP22 176 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 SLC22A25Q6T423 547 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 TUSC5Q8IXB3 177 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 RNF141Q8WVD5 230 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 GPR87Q9BY21 358 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 TLNRD1Q9H1K6 362 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 PARP11Q9NR21 331 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 FBXL17Q9UF56 701 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 ST3GAL6Q9Y274 331 aa8.21□□□□□ -1.1
TRIM39-202ENST00000376659 MED13Q9UHV7 2174 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 ARGFXA6NJG6 315 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 AADACP22760 399 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 ARF1P84077 181 aaKnown RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 NMSQ5H8A3 153 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 RAB11FIP2Q7L804 512 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 LYZL2Q7Z4W2 148 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 TMEM251Q8N6I4 163 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 OR5P3Q8WZ94 311 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 THOC3Q96J01 351 aaKnown RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 SEC11CQ9BY50 192 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 LRFN1Q9P244 771 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 MIOXQ9UGB7 285 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 LCATP04180 440 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 OPRM1P35372 400 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 RNFT1Q5M7Z0 435 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 NUFIP2Q7Z417 695 aaKnown RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 MRPL30Q8TCC3 161 aaKnown RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 GTF3AQ92664 365 aaKnown RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 WNT2BQ93097 391 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 NARS2Q96I59 477 aaKnown RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 PRRX2Q99811 253 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 NRIP2Q9BQI9 281 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 CABLES2Q9BTV7 478 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF552Q9H707 407 aaPredicted RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 BIN3Q9NQY0 253 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF629Q9UEG4 869 aaPredicted RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 IGKV1D-13A0A0B4J2D9 117 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF850A8MQ14 1090 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 HOXB5P09067 269 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 IGKV1-13P0DP09 117 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 PAX6P26367 422 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 PJVKQ0ZLH3 352 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 PRDX4Q13162 271 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 AKIRIN2Q53H80 203 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 DCAF10Q5QP82 559 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 CPNE2Q96FN4 548 aaPredicted RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 YPEL4Q96NS1 127 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 ADAT1Q9BUB4 502 aaKnown RBP8.2□□□□□ -1.1
TRIM39-202ENST00000376659 SUCNR1Q9BXA5 334 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 TAS2R3Q9NYW6 316 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 SPRR3Q9UBC9 169 aa8.2□□□□□ -1.1
TRIM39-202ENST00000376659 NPIPB11E5RHQ5 1161 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 F10P00742 488 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 APOC3P02656 99 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 OR3A2P47893 321 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 SSX2Q16385 188 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 IAH1Q2TAA2 248 aaPredicted RBP8.19□□□□□ -1.1
TRIM39-202ENST00000376659 BORCS8Q96FH0 119 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 CMSS1Q9BQ75 279 aaKnown RBP8.19□□□□□ -1.1
TRIM39-202ENST00000376659 RNF115Q9Y4L5 304 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 ARID1AO14497 2285 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 LY86O95711 162 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 KNG1P01042 644 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 PPYP01298 95 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF728P0DKX0 622 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 RPL12P30050 165 aaKnown RBP8.19□□□□□ -1.1
TRIM39-202ENST00000376659 ID4P47928 161 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 TMEM33P57088 247 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 ERVK11-1P61568 191 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 EIF4EBP1Q13541 118 aaPredicted RBP8.19□□□□□ -1.1
TRIM39-202ENST00000376659 CCDC157Q569K6 752 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 FAM76BQ5HYJ3 339 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 PLCXD3Q63HM9 321 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 Q6P435 159 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 SSX9Q7RTT3 188 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 ZFP62Q8NB50 900 aaPredicted RBP8.19□□□□□ -1.1
TRIM39-202ENST00000376659 OR56B2PQ8NGI1 322 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF251Q9BRH9 671 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 EGLN1Q9GZT9 426 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 TMEM222Q9H0R3 208 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 ZDHHC11Q9H8X9 412 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 UQCC1Q9NVA1 299 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 BOKQ9UMX3 212 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms