RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 IL18R1Q13478 541 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 NSUN5P1Q3KNT7 163 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 KRBOX4Q5JUW0 171 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 HEPN1Q6WQI6 88 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 RTN4RL2Q86UN3 420 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 PARP16Q8N5Y8 322 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 CHST4Q8NCG5 386 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 OR5AK2Q8NH90 309 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 WNT10AQ9GZT5 417 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 INPP5EQ9NRR6 644 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 TAS2R3Q9NYW6 316 aa11.43□□□□□ -0.58
NELFE-201ENST00000375425 ODAMA1E959 279 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 FAM172BPA6NC97 362 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 SLC33A1O00400 549 aaPredicted RBP11.42□□□□□ -0.58
NELFE-201ENST00000375425 SULT1B1O43704 296 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 CSN2P05814 226 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 RPSAP08865 295 aaKnown RBP11.42□□□□□ -0.58
NELFE-201ENST00000375425 CD24P25063 80 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 GBX2P52951 348 aaPredicted RBP11.42□□□□□ -0.58
NELFE-201ENST00000375425 BDH1Q02338 343 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 EMX1Q04741 257 aaPredicted RBP11.42□□□□□ -0.58
NELFE-201ENST00000375425 CDK5R1Q15078 307 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 ARSJQ5FYB0 599 aaPredicted RBP11.42□□□□□ -0.58
NELFE-201ENST00000375425 OR52I1Q8NGK6 324 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 ZNF596Q8TC21 504 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 WIPF2Q8TF74 440 aaPredicted RBP11.42□□□□□ -0.58
NELFE-201ENST00000375425 STMN2Q93045 179 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 COQ2Q96H96 371 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 S100A14Q9HCY8 104 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 FAM118AQ9NWS6 357 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 DHDHQ9UQ10 334 aa11.42□□□□□ -0.58
NELFE-201ENST00000375425 RPL36Q9Y3U8 105 aaKnown RBP11.42□□□□□ -0.58
NELFE-201ENST00000375425 IGLV1-47P01700 117 aa11.41□□□□□ -0.58
NELFE-201ENST00000375425 GDNFP39905 211 aa11.41□□□□□ -0.58
NELFE-201ENST00000375425 VDAC2P45880 294 aaPredicted RBP11.41□□□□□ -0.58
NELFE-201ENST00000375425 GTF2A1P52655 376 aaPredicted RBP11.41□□□□□ -0.58
NELFE-201ENST00000375425 MRPL28Q13084 256 aaKnown RBP11.41□□□□□ -0.58
NELFE-201ENST00000375425 ATXN7L3Q14CW9 347 aaPredicted RBP11.41□□□□□ -0.58
NELFE-201ENST00000375425 TMEM95Q3KNT9 176 aa11.41□□□□□ -0.58
NELFE-201ENST00000375425 ZNF691Q5VV52 312 aa11.41□□□□□ -0.58
NELFE-201ENST00000375425 TSEN15Q8WW01 171 aaKnown RBP11.41□□□□□ -0.58
NELFE-201ENST00000375425 NR1H4Q96RI1 486 aaPredicted RBP11.41□□□□□ -0.58
NELFE-201ENST00000375425 CITED2Q99967 270 aaPredicted RBP11.41□□□□□ -0.58
NELFE-201ENST00000375425 OCSTAMPQ9BR26 566 aa11.41□□□□□ -0.58
NELFE-201ENST00000375425 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
NELFE-201ENST00000375425 LEUTXA8MZ59 168 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 TOR1AO14656 332 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 CCDC159P0C7I6 412 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 CD34P28906 385 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 BRS3P32247 399 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 PTGFRP43088 359 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 MTNR1BP49286 362 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 BEAN1Q3B7T3 259 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 KLHL22Q53GT1 634 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 UTF1Q5T230 341 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 SAMD5Q5TGI4 173 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 SATL1Q86VE3 508 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 PQLC1Q8N2U9 271 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 ZNF565Q8N9K5 539 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 OR4D6Q8NGJ1 314 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 APH1BQ8WW43 257 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 MMP28Q9H239 520 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 PPIL3Q9H2H8 161 aaKnown RBP11.4□□□□□ -0.58
NELFE-201ENST00000375425 ZNF286AQ9HBT8 521 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 KIAA2026Q5HYC2 2103 aa11.4□□□□□ -0.58
NELFE-201ENST00000375425 H0YJX3 145 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 BUB1B-PAK6H3BSN5 160 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 HSPB6O14558 160 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 MAGEB3O15480 346 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 LIMS3P0CW19 117 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 LIMS4P0CW20 117 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 RAB3AP20336 220 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 SOX2P48431 317 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 PRRX1P54821 245 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 SMN1Q16637 294 aaKnown RBP11.39□□□□□ -0.59
NELFE-201ENST00000375425 C17orf58Q2M2W7 97 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 HLA-DRB5Q30154 266 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 LPCAT4Q643R3 524 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 ELP2Q6IA86 826 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 ZNF529Q6P280 563 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 C16orf82Q7Z2V1 217 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 NDUFA11Q86Y39 141 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 PXT1Q8NFP0 134 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 OR51T1Q8NGJ9 327 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 HAVCR2Q8TDQ0 301 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 CREB3L1Q96BA8 519 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 R3HDM4Q96D70 268 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 GPER1Q99527 375 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 OR6C3Q9NZP0 311 aa11.39□□□□□ -0.59
NELFE-201ENST00000375425 KBTBD11-OT1A0A1B0GTJ5 212 aa11.38□□□□□ -0.59
NELFE-201ENST00000375425 ZNF729A6NN14 1252 aaPredicted RBP11.38□□□□□ -0.59
NELFE-201ENST00000375425 ADARB2-AS1A8MUL3 147 aa11.38□□□□□ -0.59
NELFE-201ENST00000375425 ALDOBP05062 364 aa11.38□□□□□ -0.59
NELFE-201ENST00000375425 CGB3P0DN86 165 aa11.38□□□□□ -0.59
NELFE-201ENST00000375425 CGB7P0DN87 165 aa11.38□□□□□ -0.59
NELFE-201ENST00000375425 NFYBP25208 207 aa11.38□□□□□ -0.59
NELFE-201ENST00000375425 ARHGDIBP52566 201 aa11.38□□□□□ -0.59
NELFE-201ENST00000375425 RBM39Q14498 530 aaKnown RBP11.38□□□□□ -0.59
NELFE-201ENST00000375425 ZSCAN26Q16670 478 aa11.38□□□□□ -0.59
NELFE-201ENST00000375425 KPRPQ5T749 579 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms