RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SURF2Q15527 256 aaPredicted RBP14.67□□□□□ -0.06
RXRB-201ENST00000374680 IZUMO4Q1ZYL8 232 aa14.67□□□□□ -0.06
RXRB-201ENST00000374680 DCAF10Q5QP82 559 aa14.67□□□□□ -0.06
RXRB-201ENST00000374680 TMEM42Q69YG0 159 aa14.67□□□□□ -0.06
RXRB-201ENST00000374680 DHRS11Q6UWP2 260 aa14.67□□□□□ -0.06
RXRB-201ENST00000374680 ADAMTS17Q8TE56 1095 aa14.67□□□□□ -0.06
RXRB-201ENST00000374680 FAM173AQ9BQD7 235 aa14.67□□□□□ -0.06
RXRB-201ENST00000374680 MTCH1Q9NZJ7 389 aa14.67□□□□□ -0.06
RXRB-201ENST00000374680 EDARQ9UNE0 448 aa14.67□□□□□ -0.06
RXRB-201ENST00000374680 UBE2J1Q9Y385 318 aaPredicted RBP14.67□□□□□ -0.06
RXRB-201ENST00000374680 MED12LQ86YW9 2145 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 NKX2-6A6NCS4 301 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 PPYP01298 95 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 PRKACAP17612 351 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 CLDN18P56856 261 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 PPA1Q15181 289 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 OR2T2Q6IF00 324 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 SVBPQ8N300 66 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 HPSE2Q8WWQ2 592 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 NTNG2Q96CW9 530 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 PCDHB16Q9NRJ7 776 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 TMEM100Q9NV29 134 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 HSF4Q9ULV5 492 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 RAB19A4D1S5 217 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 FAM24AA6NFZ4 105 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 ARGFXA6NJG6 315 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 AKR1D1P51857 326 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 POLR2GP62487 172 aaKnown RBP eCLIP14.66□□□□□ -0.06
RXRB-201ENST00000374680 NAAAQ02083 359 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.66□□□□□ -0.06
RXRB-201ENST00000374680 AKR1E2Q96JD6 320 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 ESRP2Q9H6T0 727 aaKnown RBP14.66□□□□□ -0.06
RXRB-201ENST00000374680 CADP27708 2225 aa14.66□□□□□ -0.06
RXRB-201ENST00000374680 DNPH1O43598 174 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 OR8B8Q15620 311 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 RTL6Q6ICC9 239 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 TMEM217Q8N7C4 229 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 CLRN3Q8NCR9 226 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 APH1AQ96BI3 265 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 MMP26Q9NRE1 261 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 IGKV1D-13A0A0B4J2D9 117 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 RNASEK-C17orf49H0YIS7 233 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 RRP8O43159 456 aaKnown RBP14.65□□□□□ -0.06
RXRB-201ENST00000374680 IGKV1-13P0DP09 117 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 CTRB1P17538 263 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 PMP22Q01453 160 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 RIPPLY2Q5TAB7 128 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 TMEM164Q5U3C3 297 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 CTRB2Q6GPI1 263 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 ALKBH2Q6NS38 261 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 LIAT1Q6ZQX7 453 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 C2CD4CQ8TF44 421 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 DNAJB11Q9UBS4 358 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 TNFSF15O95150 251 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 SFTA3P0C7M3 94 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 EPHA1P21709 976 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 CA6P23280 308 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 DTYMKP23919 212 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 Q6ZSR3 168 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 GCNT2Q8N0V5 402 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 C1QTNF5Q9BXJ0 243 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 CCL28Q9NRJ3 127 aa14.65□□□□□ -0.06
RXRB-201ENST00000374680 ROS1P08922 2347 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 WISP2O76076 250 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 CST4P01036 141 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 LYL1P12980 280 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 PVALBP20472 110 aaPredicted RBP14.64□□□□□ -0.07
RXRB-201ENST00000374680 GNRHRP30968 328 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 FAM76BQ5HYJ3 339 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 CXorf66Q5JRM2 361 aaPredicted RBP14.64□□□□□ -0.07
RXRB-201ENST00000374680 P4HA3Q7Z4N8 544 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 GAPTQ8N292 157 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 MSI2Q96DH6 328 aaKnown RBP14.64□□□□□ -0.07
RXRB-201ENST00000374680 HIST1H2AAQ96QV6 131 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 B4GALT7Q9UBV7 327 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 ZDHHC8Q9ULC8 765 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 TERTO14746 1132 aaKnown RBP14.64□□□□□ -0.07
RXRB-201ENST00000374680 RHBDL1O75783 438 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 CST7O76096 145 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 DAOP14920 347 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 CEBPGP53567 150 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 PEAR1Q5VY43 1037 aaPredicted RBP14.64□□□□□ -0.07
RXRB-201ENST00000374680 C20orf204Q6ZNR8 217 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 TBC1D26Q86UD7 250 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 ZNF565Q8N9K5 539 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 SYT3Q9BQG1 590 aa14.64□□□□□ -0.07
RXRB-201ENST00000374680 PTPRZ1P23471 2315 aaPredicted RBP14.63□□□□□ -0.07
RXRB-201ENST00000374680 TRAPPC2LH3BP13 241 aa14.63□□□□□ -0.07
RXRB-201ENST00000374680 MEOX1P50221 254 aa14.63□□□□□ -0.07
RXRB-201ENST00000374680 MIDNQ504T8 468 aa14.63□□□□□ -0.07
RXRB-201ENST00000374680 FAM122CQ6P4D5 195 aa14.63□□□□□ -0.07
RXRB-201ENST00000374680 IQCF2Q8IXL9 164 aa14.63□□□□□ -0.07
RXRB-201ENST00000374680 ZDHHC23Q8IYP9 409 aa14.63□□□□□ -0.07
RXRB-201ENST00000374680 OR51H1Q8NH63 302 aa14.63□□□□□ -0.07
RXRB-201ENST00000374680 NRIP2Q9BQI9 281 aa14.63□□□□□ -0.07
RXRB-201ENST00000374680 REPIN1Q9BWE0 567 aaKnown RBP14.63□□□□□ -0.07
RXRB-201ENST00000374680 EIF5A2Q9GZV4 153 aaKnown RBP14.63□□□□□ -0.07
RXRB-201ENST00000374680 MLXQ9UH92 298 aa14.63□□□□□ -0.07
RXRB-201ENST00000374680 C3orf85A0A1B0GTC6 90 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms