RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 BTNL3Q6UXE8 466 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 LY6G5BQ8NDX9 201 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 OR4M2Q8NGB6 313 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 OR51D1Q8NGF3 324 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 H1FXQ92522 213 aaKnown RBP12.42□□□□□ -0.42
HSPG2-201ENST00000374673 FAM46BQ96A09 425 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 TM2D1Q9BX74 207 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 TMEM59Q9BXS4 323 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 SELENOIQ9C0D9 397 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 NAA50Q9GZZ1 169 aaKnown RBP12.42□□□□□ -0.42
HSPG2-201ENST00000374673 KCNK15Q9H427 330 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 TRAV24A0A0B4J272 114 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 MGST3O14880 152 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 TMEM127O75204 238 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 OR7C1O76099 320 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-201ENST00000374673 IL1AP01583 271 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 CSN2P05814 226 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 LIPFP07098 398 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 VBP1P61758 197 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 NCS1P62166 190 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 RPS27AP62979 156 aaKnown RBP12.41□□□□□ -0.42
HSPG2-201ENST00000374673 GRK1Q15835 563 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 TAF9Q16594 264 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 C2orf76Q3KRA6 126 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 GDPD3Q7L5L3 318 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 CHST6Q9GZX3 395 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 LIN7BQ9HAP6 207 aa12.41□□□□□ -0.42
HSPG2-201ENST00000374673 RCC2Q9P258 522 aaKnown RBP12.41□□□□□ -0.42
HSPG2-201ENST00000374673 TMEM272A0A1B0GTI8 110 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 SLC2A2P11168 524 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-201ENST00000374673 ERP29P30040 261 aaKnown RBP12.4□□□□□ -0.42
HSPG2-201ENST00000374673 RPS19P39019 145 aaKnown RBP12.4□□□□□ -0.42
HSPG2-201ENST00000374673 KCNJ3P48549 501 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 PAX8Q06710 450 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 PAN3Q58A45 887 aaKnown RBP12.4□□□□□ -0.42
HSPG2-201ENST00000374673 CROCCP3Q8IVE0 287 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 BCL7BQ9BQE9 202 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 URM1Q9BTM9 101 aaKnown RBP12.4□□□□□ -0.42
HSPG2-201ENST00000374673 TMPRSS13Q9BYE2 586 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 LPAR5Q9H1C0 372 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 PPA2Q9H2U2 334 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 SPACA1Q9HBV2 294 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 ZNF581Q9P0T4 197 aa12.4□□□□□ -0.42
HSPG2-201ENST00000374673 H3BUI4 141 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 PPIAL4GP0DN37 164 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 SERPINB10P48595 397 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 TMBIM6P55061 237 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 EDDM3BP56851 147 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 SCAND1P57086 179 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 RPL31P62899 125 aaKnown RBP12.39□□□□□ -0.43
HSPG2-201ENST00000374673 PAX5Q02548 391 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 CR1LQ2VPA4 569 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 SIGIRRQ6IA17 410 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 FAHD2BQ6P2I3 314 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-201ENST00000374673 Q71RC1 249 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-201ENST00000374673 CLVS1Q8IUQ0 354 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-201ENST00000374673 SUMF2Q8NBJ7 301 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 PTX4Q96A99 478 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 FAHD2AQ96GK7 314 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 MRI1Q9BV20 369 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 DPCDQ9BVM2 203 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-201ENST00000374673 C19orf12Q9NSK7 152 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 DAPK2Q9UIK4 370 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 RAB22AQ9UL26 194 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 CSPG4Q6UVK1 2322 aa12.39□□□□□ -0.43
HSPG2-201ENST00000374673 WNK2Q9Y3S1 2297 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 A0A0B4J203 849 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 FUOMA2VDF0 154 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 GLAP06280 429 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 RAB6AP20340 208 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 P2RX3P56373 397 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 MEF2CQ06413 473 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-201ENST00000374673 EDDM3AQ14507 147 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 ATAD3CQ5T2N8 411 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 USP43Q70EL4 1123 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 FAM185AQ8N0U4 392 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 FAM89BQ8N5H3 189 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 KIR3DL3Q8N743 410 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 OR4M1Q8NGD0 313 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 RAB2BQ8WUD1 216 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 COQ2Q96H96 371 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 NICN1Q9BSH3 213 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 C7orf69Q9H7B7 122 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 LPAR3Q9UBY5 353 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 AUP1Q9Y679 476 aa12.38□□□□□ -0.43
HSPG2-201ENST00000374673 A0A0A6YYD4 124 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 A0A1W2PQ09 198 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 HSPB6O14558 160 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 PDCD6O75340 191 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 AVPP01185 164 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 FUT3P21217 361 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 AESQ08117 197 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 PLA2G7Q13093 441 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 RBM39Q14498 530 aaKnown RBP12.37□□□□□ -0.43
HSPG2-201ENST00000374673 ATXN7L3Q14CW9 347 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-201ENST00000374673 FAM189A2Q15884 450 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 KRBOX4Q5JUW0 171 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 IDNKQ5T6J7 187 aa12.37□□□□□ -0.43
HSPG2-201ENST00000374673 RSBN1Q5VWQ0 802 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms