RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 VMO1Q7Z5L0 202 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 C22orf15Q8WYQ4 148 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 MRPS24Q96EL2 167 aaKnown RBP13.14□□□□□ -0.31
HDHD3-202ENST00000374180 MS4A7Q9GZW8 240 aaPredicted RBP13.14□□□□□ -0.31
HDHD3-202ENST00000374180 PPA2Q9H2U2 334 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 GHRLQ9UBU3 117 aa13.14□□□□□ -0.31
HDHD3-202ENST00000374180 AK6Q9Y3D8 172 aaKnown RBP13.14□□□□□ -0.31
HDHD3-202ENST00000374180 A0A1W2PP11 408 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 FUOMA2VDF0 154 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 UBBP0CG47 229 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 SMIM18P0DKX4 95 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 CD37P11049 281 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 HTR2CP28335 458 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 PSMD7P51665 324 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 MEF2CQ06413 473 aaPredicted RBP13.13□□□□□ -0.31
HDHD3-202ENST00000374180 BPIFB2Q8N4F0 458 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 Q8N7P7 452 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 TPRX1Q8N7U7 411 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 LHX4Q969G2 390 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 C1orf147Q96MC9 270 aaPredicted RBP13.13□□□□□ -0.31
HDHD3-202ENST00000374180 METTL8Q9H825 291 aaKnown RBP13.13□□□□□ -0.31
HDHD3-202ENST00000374180 SIRT7Q9NRC8 400 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 ZNF69Q9UC07 566 aa13.13□□□□□ -0.31
HDHD3-202ENST00000374180 TRAV1-2A0A0B4J238 106 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 CENPVL3A0A0U1RRI6 287 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 hCG_1809904A0A1W2PP81 198 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 A0A1W2PPE2 198 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 A0A1W2PR64 198 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 A0A1W2PRV1 198 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 hADV38S2A0JD32 116 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 HSPB6O14558 160 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 GEMIN2O14893 280 aaKnown RBP13.12□□□□□ -0.31
HDHD3-202ENST00000374180 CRTAPO75718 401 aaPredicted RBP13.12□□□□□ -0.31
HDHD3-202ENST00000374180 OR7C1O76099 320 aaPredicted RBP13.12□□□□□ -0.31
HDHD3-202ENST00000374180 ERP29P30040 261 aaKnown RBP13.12□□□□□ -0.31
HDHD3-202ENST00000374180 AESQ08117 197 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 DYNC1I2Q13409 638 aaKnown RBP13.12□□□□□ -0.31
HDHD3-202ENST00000374180 ZNF273Q14593 569 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 TAF9Q16594 264 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 CNPY1Q3B7I2 92 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 PAN3Q58A45 887 aaKnown RBP13.12□□□□□ -0.31
HDHD3-202ENST00000374180 C22orf42Q6IC83 251 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 LINC00596Q86U02 117 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 OR6M1Q8NGM8 313 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 DGCR14Q96DF8 476 aaKnown RBP13.12□□□□□ -0.31
HDHD3-202ENST00000374180 BANF2Q9H503 90 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 STUB1Q9UNE7 303 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 SSR3Q9UNL2 185 aa13.12□□□□□ -0.31
HDHD3-202ENST00000374180 TRAV24A0A0B4J272 114 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 MEX3AA1L020 520 aaKnown RBP13.11□□□□□ -0.31
HDHD3-202ENST00000374180 PDCD5O14737 125 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 SLC22A1O15245 554 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 CSN2P05814 226 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 MGMTP16455 207 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 CCL3L1P16619 93 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 PRTN3P24158 256 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 MYL9P24844 172 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 P2RX3P56373 397 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 BPIFB3P59826 476 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 MPV17LQ2QL34 196 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 KRBOX4Q5JUW0 171 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 BRD3OSQ6XYD6 125 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 PDZD9Q8IXQ8 264 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 TMEM104Q8NE00 496 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 ZNF418Q8TF45 676 aaPredicted RBP13.11□□□□□ -0.31
HDHD3-202ENST00000374180 GFI1Q99684 422 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 SELENOIQ9C0D9 397 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 CST11Q9H112 138 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 IFT22Q9H7X7 185 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 TXNL4BQ9NX01 149 aaKnown RBP13.11□□□□□ -0.31
HDHD3-202ENST00000374180 ING3Q9NXR8 418 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 V9GY05 133 aa13.11□□□□□ -0.31
HDHD3-202ENST00000374180 SLC17A2O00624 439 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 ZNF728P0DKX0 622 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 CD36P16671 472 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 FGF9P31371 208 aaPredicted RBP13.1□□□□□ -0.31
HDHD3-202ENST00000374180 GLIPR1P48060 266 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 DLX1P56177 255 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 ATXN7L3Q14CW9 347 aaPredicted RBP13.1□□□□□ -0.31
HDHD3-202ENST00000374180 ATAD3CQ5T2N8 411 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 BCL6BQ8N143 479 aaPredicted RBP13.1□□□□□ -0.31
HDHD3-202ENST00000374180 FAM46BQ96A09 425 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 SLC6A7Q99884 636 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 DPCDQ9BVM2 203 aaPredicted RBP13.1□□□□□ -0.31
HDHD3-202ENST00000374180 BARHL1Q9BZE3 327 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 UNKLQ9H9P5 680 aaKnown RBP13.1□□□□□ -0.31
HDHD3-202ENST00000374180 ZNF581Q9P0T4 197 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 LINC00312Q9Y6C7 94 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 IGHV1-69DA0A0B4J2H0 117 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 TCF21O43680 179 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 MPIG6BO95866 241 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 IGHV1-69P01742 117 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 RANBP1P43487 201 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 GUCA2AQ02747 115 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 PRB3Q04118 309 aaPredicted RBP13.1□□□□□ -0.31
HDHD3-202ENST00000374180 RAB11BQ15907 218 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 NCR3LG1Q68D85 454 aa13.1□□□□□ -0.31
HDHD3-202ENST00000374180 METAP1DQ6UB28 335 aaPredicted RBP13.1□□□□□ -0.31
HDHD3-202ENST00000374180 C9orf139Q6ZV77 190 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms