RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 SEZ6L2Q6UXD5 910 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 OR8B12Q8NGG6 310 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 OR6X1Q8NH79 312 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 RPP25Q9BUL9 199 aaKnown RBP12.57□□□□□ -0.4
LMX1B-202ENST00000373474 P4HTMQ9NXG6 502 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 VAX2Q9UIW0 290 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 OR5AC1P0C628 307 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 RNPS1Q15287 305 aaKnown RBP12.57□□□□□ -0.4
LMX1B-202ENST00000373474 OR1C1Q15619 314 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 ZNF770Q6IQ21 691 aaPredicted RBP12.57□□□□□ -0.4
LMX1B-202ENST00000373474 FAM60AQ9NP50 221 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 COL11A2P13942 1736 aaPredicted RBP12.57□□□□□ -0.4
LMX1B-202ENST00000373474 NAT2P11245 290 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 CEACAM6P40199 344 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 PLP1P60201 277 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 SRSF9Q13242 221 aaKnown RBP eCLIP12.57□□□□□ -0.4
LMX1B-202ENST00000373474 ACSM6Q6P461 480 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 GUSBP11Q6P575 273 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 DEFB108BQ8NET1 73 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 SH2D2AQ9NP31 389 aa12.57□□□□□ -0.4
LMX1B-202ENST00000373474 K7EQS6 105 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 SIAH2O43255 324 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 CTSDP07339 412 aaPredicted RBP12.56□□□□□ -0.4
LMX1B-202ENST00000373474 SP1P08047 785 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 UBE2V2Q15819 145 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 NSUN5P2Q63ZY6 315 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 DOLPP1Q86YN1 238 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 OR52L2PQ8NGH6 319 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 OR10V1Q8NGI7 309 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 GNRHR2Q96P88 292 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 ATP5SQ99766 215 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 CD226Q15762 336 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 ANKRD55Q3KP44 614 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 FAM209AQ5JX71 171 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 TAAR3PQ9P1P4 343 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 GAGE10A6NGK3 116 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 CYR61O00622 381 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 PDCD6O75340 191 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 ZNF32P17041 273 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 RPS4Y1P22090 263 aaKnown RBP12.56□□□□□ -0.4
LMX1B-202ENST00000373474 GCSHP23434 173 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 PCP4P48539 62 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 SURF2Q15527 256 aaPredicted RBP12.56□□□□□ -0.4
LMX1B-202ENST00000373474 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
LMX1B-202ENST00000373474 TRAT1Q6PIZ9 186 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 SLC52A3Q9NQ40 469 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 ZNF716A6NP11 495 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 GCGP01275 180 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 LGALSLQ3ZCW2 172 aaPredicted RBP12.56□□□□□ -0.4
LMX1B-202ENST00000373474 OR1L1Q8NH94 360 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 ZFP30Q9Y2G7 519 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 PLXNB2O15031 1838 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 PRRG2O14669 202 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 SLC25A42Q86VD7 318 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 SMDT1Q9H4I9 107 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 PARP11Q9NR21 331 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 ST6GALNAC2Q9UJ37 374 aa12.56□□□□□ -0.4
LMX1B-202ENST00000373474 RGPD3A6NKT7 1758 aaPredicted RBP12.55□□□□□ -0.4
LMX1B-202ENST00000373474 H3BMH7 237 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 PDE6DO43924 150 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 PGA4P0DJD7 388 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 PGA5P0DJD9 388 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 CAMPP49913 170 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 TMEM33P57088 247 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 GGTLC2Q14390 218 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 LIAT1Q6ZQX7 453 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 OR4A4PQ8NGN8 299 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 UBALD1Q8TB05 177 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 FBLIM1Q8WUP2 373 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 FUT9Q9Y231 359 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 MIA3Q5JRA6 1907 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 TMEM238LA0A1B0GVL6 79 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 A6NJY4 79 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 LSM11P83369 360 aaKnown RBP eCLIP12.55□□□□□ -0.4
LMX1B-202ENST00000373474 C1orf53Q5VUE5 145 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 PARD6GQ9BYG4 376 aaPredicted RBP12.55□□□□□ -0.4
LMX1B-202ENST00000373474 LIPGQ9Y5X9 500 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 SBF2Q86WG5 1849 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 IGHV1OR15-9A0A0B4J2B8 117 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 FABP2P12104 132 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 SKP2Q13309 424 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 SLC25A22Q9H936 323 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 ERRFI1Q9UJM3 462 aaPredicted RBP12.55□□□□□ -0.4
LMX1B-202ENST00000373474 TRGV10A0A0A0MS01 117 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 DIRC3C9JPN6 131 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 DLX1P56177 255 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 IFITM3Q01628 133 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 PABPC1L2AQ5JQF8 200 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 CLEC18BQ6UXF7 455 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 ISOC2Q96AB3 205 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 TBX15Q96SF7 602 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 PAM16Q9Y3D7 125 aa12.55□□□□□ -0.4
LMX1B-202ENST00000373474 LPAR6P43657 344 aa12.54□□□□□ -0.4
LMX1B-202ENST00000373474 KISS1RQ969F8 398 aaPredicted RBP12.54□□□□□ -0.4
LMX1B-202ENST00000373474 GPA33Q99795 319 aa12.54□□□□□ -0.4
LMX1B-202ENST00000373474 SCGB1A1P11684 91 aa12.54□□□□□ -0.4
LMX1B-202ENST00000373474 ALKBH6Q3KRA9 238 aa12.54□□□□□ -0.4
LMX1B-202ENST00000373474 ISLRO14498 428 aa12.54□□□□□ -0.4
LMX1B-202ENST00000373474 LANCL1O43813 399 aa12.54□□□□□ -0.4
LMX1B-202ENST00000373474 BGLAPP02818 100 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms