RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TRGC1P0CF51 173 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 MDKP21741 143 aaPredicted RBP12.82□□□□□ -0.36
COL9A2-202ENST00000372748 NKX2-1P43699 371 aaPredicted RBP12.82□□□□□ -0.36
COL9A2-202ENST00000372748 SHBQ15464 509 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 KCNMB1Q16558 191 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 OR5L2Q8NGL0 311 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 FRZBQ92765 325 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 SYT3Q9BQG1 590 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 UFSP2Q9NUQ7 469 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 PROB1E7EW31 1015 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 TNFSF12O43508 249 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 COL19A1Q14993 1142 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 Q6ZPA2 131 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 DMRTC2Q8IXT2 367 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-202ENST00000372748 TMEM252Q8N6L7 170 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 ABHD5Q8WTS1 349 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF837Q96EG3 531 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF385AQ96PM9 386 aaKnown RBP12.81□□□□□ -0.36
COL9A2-202ENST00000372748 SMOC1Q9H4F8 434 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 TMED3Q9Y3Q3 217 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 PI4KAP42356 2102 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 A0A1W2PQM1 296 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 ZFAND5O76080 213 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 RPL23AP62750 156 aaKnown RBP12.81□□□□□ -0.36
COL9A2-202ENST00000372748 CCL7P80098 99 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 TMEM123Q8N131 208 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 SMDT1Q9H4I9 107 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 PRDM6Q9NQX0 595 aa12.81□□□□□ -0.36
COL9A2-202ENST00000372748 FOXD3Q9UJU5 478 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-202ENST00000372748 CACNA1EQ15878 2313 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 C3orf85A0A1B0GTC6 90 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 OR5H1A6NKK0 313 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 CTSSP25774 331 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 DYNLT3P51808 116 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 HERV-K104P61576 105 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 SPIN3Q5JUX0 258 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 OR2M3Q8NG83 312 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 RARRES3Q9UL19 164 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 A0A087WWC5 75 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 IGKV1-12A0A0C4DH73 117 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 G3V3Y1 287 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 TLX3O43711 291 aaPredicted RBP12.8□□□□□ -0.36
COL9A2-202ENST00000372748 TMEM50AO95807 157 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 IGKV1D-12P01611 117 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 SELLP14151 372 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 RBP2P50120 134 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 LSM6P62312 80 aaKnown RBP12.8□□□□□ -0.36
COL9A2-202ENST00000372748 GTF3AQ92664 365 aaKnown RBP12.8□□□□□ -0.36
COL9A2-202ENST00000372748 MOB3AQ96BX8 217 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 RASL10BQ96S79 203 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 DEFB126Q9BYW3 111 aa12.8□□□□□ -0.36
COL9A2-202ENST00000372748 UBE2ZQ9H832 354 aaPredicted RBP12.8□□□□□ -0.36
COL9A2-202ENST00000372748 UBE2J1Q9Y385 318 aaPredicted RBP12.8□□□□□ -0.36
COL9A2-202ENST00000372748 CD63P08962 238 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 DTYMKP23919 212 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 GLIPR1P48060 266 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 VAMP2P63027 116 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 NAT6Q93015 286 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 SNX22Q96L94 193 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 ANGPTL4Q9BY76 406 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 PCED1AQ9H1Q7 454 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 BCO1Q9HAY6 547 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 ST3GAL6Q9Y274 331 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 AQP7P3A6NL99 342 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 MPPED1O15442 326 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 HSPA12AO43301 675 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 ADAM20O43506 726 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 PITX3O75364 302 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 MSX1P28360 303 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 DDTP30046 118 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 RAB11AP62491 216 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF154Q13106 437 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF695Q8IW36 515 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 DNASE2BQ8WZ79 361 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 FAM210BQ96KR6 192 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 PLEKHF2Q9H8W4 249 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF286AQ9HBT8 521 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 P4HTMQ9NXG6 502 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 GNG13Q9P2W3 67 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 MRPS17Q9Y2R5 130 aaKnown RBP12.79□□□□□ -0.36
COL9A2-202ENST00000372748 ZDBF2Q9HCK1 2354 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 A0A087X0M5 115 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 A0A1B0GX30 115 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 ETV2O00321 342 aaPredicted RBP12.79□□□□□ -0.36
COL9A2-202ENST00000372748 PPYP01298 95 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 NDUFB7P17568 137 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 SLC25A53Q5H9E4 307 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 AKR1C8PQ5T2L2 129 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 ODF3L1Q8IXM7 274 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 CMTM1Q8IZ96 169 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 CLDND2Q8NHS1 167 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 UCN2Q96RP3 112 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 C11orf1Q9H5F2 150 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 CALHM2Q9HA72 323 aa12.79□□□□□ -0.36
COL9A2-202ENST00000372748 IGHV5-10-1A0A0J9YXX1 117 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 H3BP45 60 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 SSTP61278 116 aa12.78□□□□□ -0.36
COL9A2-202ENST00000372748 HLA-DRB3P79483 266 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms