RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 FXYD6-FXYD2A0A087WZ82 144 aa21.28■■□□□ 1
CTSA-203ENST00000372459 SFT2D2O95562 160 aa21.28■■□□□ 1
CTSA-203ENST00000372459 PI3P19957 117 aa21.28■■□□□ 1
CTSA-203ENST00000372459 IGFBP7Q16270 282 aa21.28■■□□□ 1
CTSA-203ENST00000372459 SCARB1Q8WTV0 552 aa21.28■■□□□ 1
CTSA-203ENST00000372459 RBPMSQ93062 196 aaKnown RBP21.28■■□□□ 1
CTSA-203ENST00000372459 FXYD6Q9H0Q3 95 aa21.28■■□□□ 1
CTSA-203ENST00000372459 DECR2Q9NUI1 292 aa21.28■■□□□ 1
CTSA-203ENST00000372459 ESPL1Q14674 2120 aa21.27■■□□□ 1
CTSA-203ENST00000372459 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.27■■□□□ 1
CTSA-203ENST00000372459 ZNF250P15622 560 aa21.27■■□□□ 1
CTSA-203ENST00000372459 RPA2P15927 270 aa21.27■■□□□ 1
CTSA-203ENST00000372459 KITLGP21583 273 aa21.27■■□□□ 1
CTSA-203ENST00000372459 GLRA1P23415 457 aa21.27■■□□□ 1
CTSA-203ENST00000372459 DUSP1P28562 367 aa21.27■■□□□ 1
CTSA-203ENST00000372459 GCH1P30793 250 aa21.27■■□□□ 1
CTSA-203ENST00000372459 TIMM8AO60220 97 aaPredicted RBP21.27■□□□□ 0.99
CTSA-203ENST00000372459 NAAAQ02083 359 aa21.27■□□□□ 0.99
CTSA-203ENST00000372459 SRSF4Q08170 494 aaKnown RBP21.27■□□□□ 0.99
CTSA-203ENST00000372459 ZNF154Q13106 437 aa21.27■□□□□ 0.99
CTSA-203ENST00000372459 SRSF7Q16629 238 aaKnown RBP eCLIP21.27■□□□□ 0.99
CTSA-203ENST00000372459 MBNL2Q5VZF2 373 aaKnown RBP21.27■□□□□ 0.99
CTSA-203ENST00000372459 GFRALQ6UXV0 394 aa21.27■□□□□ 0.99
CTSA-203ENST00000372459 NEK7Q8TDX7 302 aa21.27■□□□□ 0.99
CTSA-203ENST00000372459 MUCL1Q96DR8 90 aa21.27■□□□□ 0.99
CTSA-203ENST00000372459 PDCD10Q9BUL8 212 aa21.27■□□□□ 0.99
CTSA-203ENST00000372459 ARL6Q9H0F7 186 aa21.27■□□□□ 0.99
CTSA-203ENST00000372459 RDH8Q9NYR8 311 aa21.27■□□□□ 0.99
CTSA-203ENST00000372459 C3orf36Q3SXR2 165 aa21.26■□□□□ 0.99
CTSA-203ENST00000372459 CLEC18BQ6UXF7 455 aa21.26■□□□□ 0.99
CTSA-203ENST00000372459 Q6ZPA2 131 aa21.26■□□□□ 0.99
CTSA-203ENST00000372459 Q6ZS49 121 aa21.26■□□□□ 0.99
CTSA-203ENST00000372459 KCTD9Q7L273 389 aa21.26■□□□□ 0.99
CTSA-203ENST00000372459 WDR13Q9H1Z4 485 aa21.26■□□□□ 0.99
CTSA-203ENST00000372459 RFPL4AA6NLU0 287 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 RFPL4AL1F8VTS6 287 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 H0YL77 283 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 NAPSAO96009 420 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 GLAP06280 429 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 ZNF83P51522 516 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 GSG1LQ6UXU4 331 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 SUMF2Q8NBJ7 301 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 PIGMQ9H3S5 423 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 IFT22Q9H7X7 185 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 TINAGQ9UJW2 476 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 DBX1A6NMT0 343 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 A8MXE2 369 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 CTSDP07339 412 aaPredicted RBP21.25■□□□□ 0.99
CTSA-203ENST00000372459 BMP5P22003 454 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 FABP6P51161 128 aa21.25■□□□□ 0.99
CTSA-203ENST00000372459 GTF3AQ92664 365 aaKnown RBP21.25■□□□□ 0.99
CTSA-203ENST00000372459 SNRNP40Q96DI7 357 aaKnown RBP21.25■□□□□ 0.99
CTSA-203ENST00000372459 BSNQ9UPA5 3926 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 A0A0B4J2A0 478 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 HSPB6O14558 160 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 CCSO14618 274 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 CDIPTO14735 213 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 CD8AP01732 235 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 NMBP08949 121 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 FAM87AP0C7U9 286 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 GLP1RP43220 463 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 ERVK11-1P61568 191 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 SUPT4H1P63272 117 aaKnown RBP21.24■□□□□ 0.99
CTSA-203ENST00000372459 FGL1Q08830 312 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 RBM39Q14498 530 aaKnown RBP21.24■□□□□ 0.99
CTSA-203ENST00000372459 TMEM65Q6PI78 240 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 COQ8AQ8NI60 647 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 REG4Q9BYZ8 158 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 LIME1Q9H400 295 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 RIMS4Q9H426 269 aaPredicted RBP21.24■□□□□ 0.99
CTSA-203ENST00000372459 Q9N2K0 584 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 SHPKQ9UHJ6 478 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 DMXL2Q8TDJ6 3036 aa21.24■□□□□ 0.99
CTSA-203ENST00000372459 MFSD2BA6NFX1 497 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 EEF1E1-BLOC1S5C9J1V9 151 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 M0R1B8 84 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 MLNRO43193 412 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 KNG1P01042 644 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 GRPP07492 148 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 PGA5P0DJD9 388 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 SLC9A3R2Q15599 337 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 RGS7BPQ6MZT1 257 aaPredicted RBP21.23■□□□□ 0.99
CTSA-203ENST00000372459 NRIP2Q9BQI9 281 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 CXXC4Q9H2H0 198 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 FZR1Q9UM11 496 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 RAXQ9Y2V3 346 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 FCGR2CP31995 323 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 SORDQ00796 357 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 ALKBH2Q6NS38 261 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 SPERTQ8NA61 448 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 SDHAF2Q9NX18 166 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 ZNF835Q9Y2P0 537 aa21.23■□□□□ 0.99
CTSA-203ENST00000372459 TRAV24A0A0B4J272 114 aa21.22■□□□□ 0.99
CTSA-203ENST00000372459 HS3ST1O14792 307 aa21.22■□□□□ 0.99
CTSA-203ENST00000372459 DEGS1O15121 323 aa21.22■□□□□ 0.99
CTSA-203ENST00000372459 ZP3P21754 424 aa21.22■□□□□ 0.99
CTSA-203ENST00000372459 SPEF1Q9Y4P9 236 aa21.22■□□□□ 0.99
CTSA-203ENST00000372459 A0A0G2JNJ9 132 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 FAM25EA8MYX2 175 aa21.21■□□□□ 0.99
CTSA-203ENST00000372459 ACAA1P09110 424 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms