RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 PRKACAP17612 351 aa9.9□□□□□ -0.83
RAB39B-201ENST00000369454 CAV2P51636 162 aa9.9□□□□□ -0.83
RAB39B-201ENST00000369454 OR8U1Q8NH10 309 aa9.9□□□□□ -0.83
RAB39B-201ENST00000369454 ADAMTS17Q8TE56 1095 aa9.9□□□□□ -0.83
RAB39B-201ENST00000369454 MTCH1Q9NZJ7 389 aa9.9□□□□□ -0.83
RAB39B-201ENST00000369454 UBE2J1Q9Y385 318 aaPredicted RBP9.9□□□□□ -0.83
RAB39B-201ENST00000369454 RRP8O43159 456 aaKnown RBP9.89□□□□□ -0.83
RAB39B-201ENST00000369454 PRH1P02810 166 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 DTYMKP23919 212 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 NAAAQ02083 359 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 PPA1Q15181 289 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 OR2T2Q6IF00 324 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 DHRS11Q6UWP2 260 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 ETV3LQ6ZN32 361 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 Q6ZSR3 168 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 SVBPQ8N300 66 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 C1QTNF5Q9BXJ0 243 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 SH3BGRL3Q9H299 93 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 UQCC1Q9NVA1 299 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 AMDHD2Q9Y303 409 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 SELEP16581 610 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 MEOX1P50221 254 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 PMP22Q01453 160 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 PJVKQ0ZLH3 352 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 DAZAP2Q15038 168 aaPredicted RBP9.89□□□□□ -0.83
RAB39B-201ENST00000369454 GCNT2Q8N0V5 402 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 HIST1H2AAQ96QV6 131 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 RGCCQ9H4X1 137 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 ABI3Q9P2A4 366 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 MGAQ8IWI9 3026 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 MEX3AA1L020 520 aaKnown RBP9.89□□□□□ -0.83
RAB39B-201ENST00000369454 RAB19A4D1S5 217 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 ARGFXA6NJG6 315 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 LIAT1Q6ZQX7 453 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 ZDHHC23Q8IYP9 409 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 SAV1Q9H4B6 383 aaPredicted RBP9.89□□□□□ -0.83
RAB39B-201ENST00000369454 MMP26Q9NRE1 261 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 TMEM100Q9NV29 134 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 DNAJB11Q9UBS4 358 aa9.89□□□□□ -0.83
RAB39B-201ENST00000369454 NKX2-6A6NCS4 301 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 C9JQL5 133 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 TRAPPC2LH3BP13 241 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 TERTO14746 1132 aaKnown RBP9.88□□□□□ -0.83
RAB39B-201ENST00000369454 CA6P23280 308 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 PPT1P50897 306 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 PLP2Q04941 152 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 MYPOPQ86VE0 399 aaPredicted RBP9.88□□□□□ -0.83
RAB39B-201ENST00000369454 ZNF565Q8N9K5 539 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 CCDC54Q8NEL0 328 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 SYT3Q9BQG1 590 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 RCL1Q9Y2P8 373 aaKnown RBP9.88□□□□□ -0.83
RAB39B-201ENST00000369454 GTF3C1Q12789 2109 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 MED12LQ86YW9 2145 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 CA11O75493 328 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 CST4P01036 141 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 LYL1P12980 280 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 POLR2GP62487 172 aaKnown RBP eCLIP9.88□□□□□ -0.83
RAB39B-201ENST00000369454 HOXA4Q00056 320 aaPredicted RBP9.88□□□□□ -0.83
RAB39B-201ENST00000369454 EIF3IQ13347 325 aaKnown RBP9.88□□□□□ -0.83
RAB39B-201ENST00000369454 GAPTQ8N292 157 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 TMEM217Q8N7C4 229 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 REPIN1Q9BWE0 567 aaKnown RBP9.88□□□□□ -0.83
RAB39B-201ENST00000369454 ESRP2Q9H6T0 727 aaKnown RBP9.88□□□□□ -0.83
RAB39B-201ENST00000369454 WFDC1Q9HC57 220 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 PCDHB16Q9NRJ7 776 aa9.88□□□□□ -0.83
RAB39B-201ENST00000369454 IGKV1D-13A0A0B4J2D9 117 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 RHBDL1O75783 438 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 MT-CO3P00414 261 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 SFTA3P0C7M3 94 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 IGKV1-13P0DP09 117 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 EPHA1P21709 976 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 GNRHRP30968 328 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 ECI1P42126 302 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 IZUMO4Q1ZYL8 232 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 EIF5AL1Q6IS14 154 aaKnown RBP9.87□□□□□ -0.83
RAB39B-201ENST00000369454 ALKBH2Q6NS38 261 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 P4HA3Q7Z4N8 544 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 TBC1D26Q86UD7 250 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 CLRN3Q8NCR9 226 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 AKR1E2Q96JD6 320 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 C20orf24Q9BUV8 137 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 C3orf85A0A1B0GTC6 90 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 FAM24AA6NFZ4 105 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 CD300LBA8K4G0 201 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 TK1P04183 234 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 ZNF44P15621 663 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 HES3Q5TGS1 186 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 ZNF818PQ6ZRF7 136 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 ZNF695Q8IW36 515 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 MKXQ8IYA7 352 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 LGI3Q8N145 548 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 OR51H1Q8NH63 302 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 MOB3AQ96BX8 217 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 MSI2Q96DH6 328 aaKnown RBP9.87□□□□□ -0.83
RAB39B-201ENST00000369454 PRDM14Q9GZV8 571 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 CCL28Q9NRJ3 127 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 PCP4L1A6NKN8 68 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 RNASEK-C17orf49H0YIS7 233 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 SSSCA1O60232 199 aa9.87□□□□□ -0.83
RAB39B-201ENST00000369454 SP9P0CG40 484 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms