RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PSG4Q00888 419 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 ACTBL2Q562R1 376 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 UBAC2Q8NBM4 344 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 GJC3Q8NFK1 279 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 RRNAD1Q96FB5 475 aaKnown RBP9.23□□□□□ -0.93
TPM3-212ENST00000368533 ZNF799Q96GE5 643 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 S100A13Q99584 98 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 TMEM59Q9BXS4 323 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 ZDHHC8Q9ULC8 765 aa9.23□□□□□ -0.93
TPM3-212ENST00000368533 MED19A0JLT2 244 aaPredicted RBP9.22□□□□□ -0.93
TPM3-212ENST00000368533 C7orf77A4D0Y5 90 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 PROB1E7EW31 1015 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 SDCBPO00560 298 aaPredicted RBP9.22□□□□□ -0.93
TPM3-212ENST00000368533 MT-ND4LP03901 98 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 SPCS3P61009 180 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 FOXRED2Q8IWF2 684 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 SPACA3Q8IXA5 215 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 BAP18Q8IXM2 172 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 ZADH2Q8N4Q0 377 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 RNF141Q8WVD5 230 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 DCUN1D4Q92564 292 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 APH1AQ96BI3 265 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 PIK3IP1Q96FE7 263 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 ABHD17AQ96GS6 310 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 MMP26Q9NRE1 261 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 GFOD1Q9NXC2 390 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 MMP24Q9Y5R2 645 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 A0A1B0GWJ7 208 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 MSGN1A6NI15 193 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 FBXO24O75426 580 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 LYZL6O75951 148 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 AMY2BP19961 511 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 LPAR6P43657 344 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 KIAA0141Q14154 515 aaPredicted RBP9.22□□□□□ -0.93
TPM3-212ENST00000368533 RSU1Q15404 277 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 IGFBP7Q16270 282 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 C10orf128Q5T292 105 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 SLC25A42Q86VD7 318 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 OR51T1Q8NGJ9 327 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 LYZL4Q96KX0 146 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 EGLN1Q9GZT9 426 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 LOC390937A0A1W2PQ73 354 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 RAD51DO75771 328 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 FAM157CP0CG43 387 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 ZBTB25P24278 435 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 S100A2P29034 98 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 DDTP30046 118 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 SERPINF1P36955 418 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 RPS10P46783 165 aaKnown RBP9.22□□□□□ -0.93
TPM3-212ENST00000368533 CPEB3Q8NE35 698 aaKnown RBP9.22□□□□□ -0.93
TPM3-212ENST00000368533 KCNG3Q8TAE7 436 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 PIGTQ969N2 578 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 PTX4Q96A99 478 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 PHYHIPLQ96FC7 376 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 ZDHHC11Q9H8X9 412 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 GSKIPQ9P0R6 139 aa9.22□□□□□ -0.93
TPM3-212ENST00000368533 IGHV3-64DA0A0J9YX35 117 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 A0A1B0GTI1 187 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 FAM87AP0C7U9 286 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 SERPINA2P20848 420 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 GSK3AP49840 483 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 FOXF2Q12947 444 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 OR2A2Q6IF42 318 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 PNLDC1Q8NA58 520 aaKnown RBP9.21□□□□□ -0.93
TPM3-212ENST00000368533 ARHGAP5-AS1Q96IT6 56 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 OCSTAMPQ9BR26 566 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 METTL8Q9H825 291 aaKnown RBP9.21□□□□□ -0.93
TPM3-212ENST00000368533 CACFD1Q9UGQ2 172 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 TP53TG5Q9Y2B4 290 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 AMDHD2Q9Y303 409 aa9.21□□□□□ -0.93
TPM3-212ENST00000368533 MRPS18CQ9Y3D5 142 aaKnown RBP9.21□□□□□ -0.93
TPM3-212ENST00000368533 ZNF587BE7ETH6 402 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 MED6O75586 246 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 TPT1P13693 172 aaKnown RBP9.21□□□□□ -0.94
TPM3-212ENST00000368533 LSM6P62312 80 aaKnown RBP9.21□□□□□ -0.94
TPM3-212ENST00000368533 RELQ04864 619 aaPredicted RBP9.21□□□□□ -0.94
TPM3-212ENST00000368533 VWA1Q6PCB0 445 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 REC114Q7Z4M0 266 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 OR5H2Q8NGV7 314 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 URM1Q9BTM9 101 aaKnown RBP9.21□□□□□ -0.94
TPM3-212ENST00000368533 GPR61Q9BZJ8 451 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 LPAR5Q9H1C0 372 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 ZNF701Q9NV72 531 aaPredicted RBP9.21□□□□□ -0.94
TPM3-212ENST00000368533 RAXQ9Y2V3 346 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 ARHGAP21Q5T5U3 1957 aa9.21□□□□□ -0.94
TPM3-212ENST00000368533 KNG1P01042 644 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 CD8AP01732 235 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 RBMXP38159 391 aaKnown RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 MRPS34P82930 218 aaKnown RBP9.2□□□□□ -0.94
TPM3-212ENST00000368533 OR8G1Q15617 311 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 FAM27BQ5VT28 67 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 LPCAT3Q6P1A2 487 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 SPNS3Q6ZMD2 512 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 CSNK2A3Q8NEV1 391 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 C5orf49A4QMS7 147 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 CDC14BO60729 498 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 SCGNO76038 276 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 MELTFP08582 738 aa9.2□□□□□ -0.94
TPM3-212ENST00000368533 OR8U9P0C7N5 309 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms