RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FAM185AQ8N0U4 392 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 OR8H2Q8N162 312 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 SUMF2Q8NBJ7 301 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 CHST4Q8NCG5 386 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 OR5D13Q8NGL4 314 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 LGALS14Q8TCE9 139 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 RAB2BQ8WUD1 216 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 RAB40AQ8WXH6 277 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 CYYR1Q96J86 154 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 NUDT16L1Q9BRJ7 211 aaKnown RBP11.5□□□□□ -0.57
TPM3-211ENST00000368531 URM1Q9BTM9 101 aaKnown RBP11.5□□□□□ -0.57
TPM3-211ENST00000368531 FAM234AQ9H0X4 552 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 LPAR5Q9H1C0 372 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 RPUSD1Q9UJJ7 312 aaKnown RBP11.5□□□□□ -0.57
TPM3-211ENST00000368531 RAB22AQ9UL26 194 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 PEX16Q9Y5Y5 336 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 CEPT1Q9Y6K0 416 aa11.5□□□□□ -0.57
TPM3-211ENST00000368531 A0A0A6YYD4 124 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 IGHV2-70DA0A0C4DH43 119 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 LDLRAD4O15165 306 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 ENSAO43768 121 aaKnown RBP11.49□□□□□ -0.57
TPM3-211ENST00000368531 ECDO95905 644 aaPredicted RBP11.49□□□□□ -0.57
TPM3-211ENST00000368531 CFPP27918 469 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 BLVRBP30043 206 aaPredicted RBP11.49□□□□□ -0.57
TPM3-211ENST00000368531 VEGFCP49767 419 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 AESQ08117 197 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 BLMHQ13867 455 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 NKAPLQ5M9Q1 402 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 SIGIRRQ6IA17 410 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 RAB12Q6IQ22 244 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 LINC00596Q86U02 117 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 OR5H6Q8NGV6 325 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 ISOC1Q96CN7 298 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 DCTN5Q9BTE1 182 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 DPCDQ9BVM2 203 aaPredicted RBP11.49□□□□□ -0.57
TPM3-211ENST00000368531 BARHL1Q9BZE3 327 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 C19orf12Q9NSK7 152 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 KCNS2Q9ULS6 477 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 INSIG2Q9Y5U4 225 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 ABCA1O95477 2261 aa11.49□□□□□ -0.57
TPM3-211ENST00000368531 DSCAML1Q8TD84 2053 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 PPIAL4CA0A0B4J2A2 164 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 A0A0G2JMP0 313 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 A0A0X1KG70 313 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 UBE2QL1A1L167 161 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 A8MV72 311 aaPredicted RBP11.48□□□□□ -0.57
TPM3-211ENST00000368531 MCRIP1C9JLW8 97 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 MGST3O14880 152 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 GPR37O15354 613 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 SOCS1O15524 211 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 PPIAL4GP0DN37 164 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 GLIPR1P48060 266 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 RPL31P62899 125 aaKnown RBP11.48□□□□□ -0.57
TPM3-211ENST00000368531 PAX2Q02962 417 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 KRBOX4Q5JUW0 171 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 BTNL3Q6UXE8 466 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 CROCCP3Q8IVE0 287 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 OR4M2Q8NGB6 313 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 SLC25A46Q96AG3 418 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 NEDD4LQ96PU5 975 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 TM2D1Q9BX74 207 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 ATG5Q9H1Y0 275 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 C7orf69Q9H7B7 122 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 ONECUT1Q9UBC0 465 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 POLR3KQ9Y2Y1 108 aaPredicted RBP11.48□□□□□ -0.57
TPM3-211ENST00000368531 TEX15Q9BXT5 2789 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 OTOGQ6ZRI0 2925 aa11.48□□□□□ -0.57
TPM3-211ENST00000368531 AKAP9Q99996 3911 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 KIR2DS1A0A191URI9 304 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 H3BMQ9 156 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 PDCD6O75340 191 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 RAB6AP20340 208 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 FUT3P21217 361 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 RORCP51449 518 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 ARF6P62330 175 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 CR1LQ2VPA4 569 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 TMEM200BQ69YZ2 307 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 C6orf201Q7Z4U5 140 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 PLPPR1Q8TBJ4 325 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 DYRK2Q92630 601 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 COQ2Q96H96 371 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 FAAP24Q9BTP7 215 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 IFT22Q9H7X7 185 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 FBLN5Q9UBX5 448 aa11.47□□□□□ -0.57
TPM3-211ENST00000368531 WNK2Q9Y3S1 2297 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 A0A075B6Q4 140 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 TRAV39A0A0B4J263 110 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 DPPA5A6NC42 116 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A10PA6NDY2 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A18PA6NE21 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A16PA6NEW6 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A20PA6NIJ5 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A8PA6NJQ4 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A7PA6NKC0 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A22PA8MWA6 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A12PA8MX19 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A5PA8MXJ8 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 FAM90A23PA8MXZ1 464 aa11.46□□□□□ -0.57
TPM3-211ENST00000368531 LIPFP07098 398 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms