RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 ATP6AP1LQ52LC2 224 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 PYDC2Q56P42 97 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 CYHR1Q6ZMK1 362 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 ST13P4Q8IZP2 240 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 CMTM2Q8TAZ6 248 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 MSANTD3Q96H12 275 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 YPEL4Q96NS1 127 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 PKMYT1Q99640 499 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 SLC25A31Q9H0C2 315 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 MFSD1Q9H3U5 465 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 DUSP21Q9H596 190 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 WDR55Q9H6Y2 383 aaPredicted RBP1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 MAT2BQ9NZL9 334 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 ENPP5Q9UJA9 477 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 STK38LQ9Y2H1 464 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 SYNRGQ9UMZ2 1314 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 NOS1P29475 1434 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 DOCK6Q96HP0 2047 aa1.56□□□□□ -2.16
ECHDC1-201ENST00000368287 NACADO15069 1562 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 LTBP2Q14767 1821 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 IGHV3-21A0A0B4J1V1 117 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 LOC100506127A0A0U1RQW1 187 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 GMNCA6NCL1 334 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 F5H5P2 479 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 UPK2O00526 184 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 SPOPO43791 374 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 BRI3O95415 125 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 CA2P00918 260 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 CST4P01036 141 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 TPM1P09493 284 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 PTHLHP12272 177 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 GABRA1P14867 456 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 IL12BP29460 328 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 TSPOP30536 169 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 NUDT2P50583 147 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 Q3ZCU0 254 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 HBMQ6B0K9 141 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 ELP2Q6IA86 826 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 LAIR2Q6ISS4 152 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 AHSA2Q719I0 299 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 GATD1Q8NB37 220 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 OR2Y1Q8NGV0 311 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 TWIST2Q8WVJ9 160 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 ANAPC13Q9BS18 74 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 GABARAPL1Q9H0R8 117 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 FBXL15Q9H469 300 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 TAS2R13Q9NYV9 303 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 BTRCQ9Y297 605 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 ZNF443Q9Y2A4 671 aaPredicted RBP1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 NRCAMQ92823 1304 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 SSH2Q76I76 1423 aa1.55□□□□□ -2.16
ECHDC1-201ENST00000368287 TRAV8-3A0A0A6YYJ7 113 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 PGPA6NDG6 321 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 GGTLC3B5MD39 225 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 K7ERS5 55 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 GTF2F2P13984 249 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 HADHBP55084 474 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 OR10A3P58181 314 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 VSNL1P62760 191 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 PRDX1Q06830 199 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 BAXQ07812 192 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 TRAM1Q15629 374 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 CEACAM21Q3KPI0 293 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 TTMPQ5BVD1 217 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 NXNL2Q5VZ03 156 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 TMEM215Q68D42 235 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 HCP5Q6MZN7 132 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 FAM19A3Q7Z5A8 133 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 LYPD6Q86Y78 171 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 TMEM25Q86YD3 366 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 EIF4E3Q8N5X7 224 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 TRIML2Q8N7C3 387 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 ZIC4Q8N9L1 334 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 OR4K17Q8NGC6 315 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 OR8A1Q8NGG7 326 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 NELFBQ8WX92 580 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 C14orf166Q9Y224 244 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 SNX24Q9Y343 169 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 MMACHCQ9Y4U1 282 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 U3KQK5 164 aa1.54□□□□□ -2.16
ECHDC1-201ENST00000368287 IGKV1D-37A0A075B6S9 117 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 A0A1B0GTI1 187 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 A6NED7 52 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 PCNX2A6NKB5 2137 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 CD300LBA8K4G0 201 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 ZNF878C9JN71 531 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 H3BMM0 161 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 PDCD6O75340 191 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 IGHV3-53P01767 116 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 LCTP09848 1927 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 SCGB1C2P0DMR2 95 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 CTLA4P16410 223 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 ZNF708P17019 499 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 PRTN3P24158 256 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 CNTFRP26992 372 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 TTPAP49638 278 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 RAB25P57735 213 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 KRTAP12-3P60328 96 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 DSTNP60981 165 aa1.53□□□□□ -2.16
ECHDC1-201ENST00000368287 DHRS2Q13268 280 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms