RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 TMEM267Q0VDI3 215 aaPredicted RBP7.36□□□□□ -1.23
PTPRK-206ENST00000368215 SURF2Q15527 256 aaPredicted RBP7.36□□□□□ -1.23
PTPRK-206ENST00000368215 PDLIM3Q53GG5 364 aaPredicted RBP7.36□□□□□ -1.23
PTPRK-206ENST00000368215 TMEM65Q6PI78 240 aa7.36□□□□□ -1.23
PTPRK-206ENST00000368215 H2BFWTQ7Z2G1 175 aa7.36□□□□□ -1.23
PTPRK-206ENST00000368215 OR5C1Q8NGR4 320 aa7.36□□□□□ -1.23
PTPRK-206ENST00000368215 WNT2BQ93097 391 aa7.36□□□□□ -1.23
PTPRK-206ENST00000368215 IMMP1LQ96LU5 166 aa7.36□□□□□ -1.23
PTPRK-206ENST00000368215 SHARPINQ9H0F6 387 aa7.36□□□□□ -1.23
PTPRK-206ENST00000368215 ZNF407Q9C0G0 2248 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 CEACAM6P40199 344 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 ZNF718Q3SXZ3 478 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 NHLRC3Q5JS37 347 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 FAM185AQ8N0U4 392 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 SLC25A28Q96A46 364 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 NIPSNAP3BQ9BS92 247 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 MMP26Q9NRE1 261 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 MPPED1O15442 326 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 NGFP01138 241 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 IL2RAP01589 272 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 SLC25A4P12235 298 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 OR2B8PP59922 312 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 PPP1CBP62140 327 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 TLE1Q04724 770 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 OR2A2Q6IF42 318 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 LIAT1Q6ZQX7 453 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 RNF144BQ7Z419 303 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 OR2C3Q8N628 320 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 OR4A16Q8NH70 328 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 C19orf12Q9NSK7 152 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 PSENENQ9NZ42 101 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 TINAGQ9UJW2 476 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 IGHV3-43A0A0B4J1X8 118 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 AGFG2O95081 481 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 IGHV3-43DP0DP04 118 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 ACKR3P25106 362 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 GUK1Q16774 197 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 CBLN2Q8IUK8 224 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 CLRN3Q8NCR9 226 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 S100PBPQ96BU1 408 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 SLC26A1Q9H2B4 701 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 GCM1Q9NP62 436 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 FOXJ2Q9P0K8 574 aa7.35□□□□□ -1.23
PTPRK-206ENST00000368215 TMEM218A2RU14 115 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 NKX2-6A6NCS4 301 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 NUDT19A8MXV4 375 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 MFNGO00587 321 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 CRYAAP02489 173 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 SP1P08047 785 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 CYC1P08574 325 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 NPBWR2P48146 333 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 RBM11P57052 281 aaKnown RBP7.34□□□□□ -1.23
PTPRK-206ENST00000368215 DHODHQ02127 395 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 HMGN3Q15651 99 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 WNT5BQ9H1J7 359 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 TRAV17A0A0B4J275 112 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 C21orf140B9A014 251 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 TRIM77I1YAP6 450 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 ACTL6BO94805 426 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 SELEP16581 610 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 PRAMEF5Q5TYX0 476 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 PRAMEF6Q5VXH4 476 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 RGS7BPQ6MZT1 257 aaPredicted RBP7.34□□□□□ -1.23
PTPRK-206ENST00000368215 RTN4RL2Q86UN3 420 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 MDP1Q86V88 176 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 PAQR4Q8N4S7 273 aaPredicted RBP7.34□□□□□ -1.23
PTPRK-206ENST00000368215 OR2Z1Q8NG97 314 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 DYNLRB1Q9NP97 96 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 LIN7CQ9NUP9 197 aaKnown RBP7.34□□□□□ -1.23
PTPRK-206ENST00000368215 CACNG5Q9UF02 275 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 PRSS50Q9UI38 385 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 AMDHD2Q9Y303 409 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 DTYMKP23919 212 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 HOXA1P49639 335 aaPredicted RBP7.34□□□□□ -1.23
PTPRK-206ENST00000368215 ZNF83P51522 516 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 ZNF345Q14585 488 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 C10orf128Q5T292 105 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 IL34Q6ZMJ4 242 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 SLC35G3Q8N808 338 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 FADS6Q8N9I5 356 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 LFNGQ8NES3 379 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 GALMQ96C23 342 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 GNPNAT1Q96EK6 184 aaPredicted RBP7.34□□□□□ -1.23
PTPRK-206ENST00000368215 SIGLEC12Q96PQ1 595 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 OPA3Q9H6K4 179 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 KIAA1671Q9BY89 1806 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 C2orf16Q68DN1 1984 aa7.34□□□□□ -1.23
PTPRK-206ENST00000368215 IGKV1-9A0A0C4DH69 117 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 LNP1A1A4G5 178 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 LRP5LA4QPB2 252 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 C5orf63A6NC05 138 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 MPTX1A8MV57 137 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 CDRT15L2A8MXV6 281 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 HMGB3O15347 200 aaKnown RBP7.34□□□□□ -1.24
PTPRK-206ENST00000368215 GPR37O15354 613 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 SPRY3O43610 288 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 NDUFB7P17568 137 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 OR3A1P47881 315 aa7.34□□□□□ -1.24
PTPRK-206ENST00000368215 NOVA1P51513 510 aaKnown RBP7.34□□□□□ -1.24
PTPRK-206ENST00000368215 UQCC3Q6UW78 93 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms