RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ASB13Q8WXK3 278 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 DOK5Q9P104 306 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 MDC1Q14676 2089 aaKnown RBP10.13□□□□□ -0.79
SYNE1-204ENST00000367248 BPIFB3P59826 476 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 CEBPEQ15744 281 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 PECRQ9BY49 303 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 HEXA-AS1Q9H8Q6 139 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 TOR2AQ5JU69 321 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 TMEM56Q96MV1 263 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 PIMREGQ9BSJ6 248 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 RPS10-NUDT3A0A1W2PQS6 291 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 SLC25A6P12236 298 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 S100A4P26447 101 aaKnown RBP10.12□□□□□ -0.79
SYNE1-204ENST00000367248 RPS10P46783 165 aaKnown RBP10.12□□□□□ -0.79
SYNE1-204ENST00000367248 SPICQ8N5J4 248 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 MARC2Q969Z3 335 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 WDR89Q96FK6 387 aaPredicted RBP10.12□□□□□ -0.79
SYNE1-204ENST00000367248 CCL13Q99616 98 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 SMCO4Q9NRQ5 59 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 PSG4Q00888 419 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 PFDN5Q99471 154 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 TMED3Q9Y3Q3 217 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 INSIG2Q9Y5U4 225 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 PPIAL4EA0A075B759 164 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 IGHV3-21A0A0B4J1V1 117 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 PPIAL4DF5H284 164 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 ADAM10O14672 748 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 PPIAL4FP0DN26 164 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 MRPS11P82912 194 aaKnown RBP10.12□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF488Q96MN9 340 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 PPIAL4AQ9Y536 164 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 IGKV3D-11A0A0A0MRZ8 115 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 TTRP02766 147 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 BCL3P20749 454 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 APCDD1LQ8NCL9 501 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 MED9Q9NWA0 146 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 STARD10Q9Y365 291 aa10.12□□□□□ -0.79
SYNE1-204ENST00000367248 IGHV3-72A0A0B4J1Y9 119 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 ATP6V1G2-DDX39BF2Z307 99 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 CA11O75493 328 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 GZMHP20718 246 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 HIST2H3PS2Q5TEC6 136 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 SPACA3Q8IXA5 215 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 ZFP82Q8N141 532 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 NDFIP1Q9BT67 221 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 ANXA10Q9UJ72 324 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 RCL1Q9Y2P8 373 aaKnown RBP10.11□□□□□ -0.79
SYNE1-204ENST00000367248 TRAV8-7A0A075B6U6 113 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 CYTIPO60759 359 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 HAND1O96004 215 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 NUBP1P53384 320 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 ADGRG7Q96K78 797 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 KCNK15Q9H427 330 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 RFPL4AA6NLU0 287 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 RFPL4AL1F8VTS6 287 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 MPV17LQ2QL34 196 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 ABHD1Q96SE0 405 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 KCNK17Q96T54 332 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 SAMD10Q9BYL1 202 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 WDR13Q9H1Z4 485 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 VSIG8P0DPA2 414 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 CSRP1P21291 193 aaKnown RBP10.11□□□□□ -0.79
SYNE1-204ENST00000367248 RPS4Y1P22090 263 aaKnown RBP10.11□□□□□ -0.79
SYNE1-204ENST00000367248 TFPI2P48307 235 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 ADIRFQ15847 76 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 C1orf174Q8IYL3 243 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 WFDC6Q9BQY6 131 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 SOX7Q9BT81 388 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 RBM38Q9H0Z9 239 aaKnown RBP10.11□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF665Q9H7R5 613 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 SFT2D2O95562 160 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 ACOT6Q3I5F7 207 aaPredicted RBP10.11□□□□□ -0.79
SYNE1-204ENST00000367248 SSX7Q7RTT5 188 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 BTF3L4Q96K17 158 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 SIGLEC12Q96PQ1 595 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 ACTR3CQ9C0K3 210 aaPredicted RBP10.11□□□□□ -0.79
SYNE1-204ENST00000367248 GPR27Q9NS67 375 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 OR1A1Q9P1Q5 309 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 SLC25A10Q9UBX3 287 aaPredicted RBP10.11□□□□□ -0.79
SYNE1-204ENST00000367248 RNF115Q9Y4L5 304 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 DCTN6O00399 190 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 GEMIN2O14893 280 aaKnown RBP10.11□□□□□ -0.79
SYNE1-204ENST00000367248 YAE1D1Q9NRH1 226 aa10.11□□□□□ -0.79
SYNE1-204ENST00000367248 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.11□□□□□ -0.79
SYNE1-204ENST00000367248 SBF2Q86WG5 1849 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF705FA8MVS1 300 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 MBP02144 154 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF705DP0CH99 300 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF705BP0CI00 300 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 M6PRP20645 277 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 PPP1R1AQ13522 171 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 ADTRPQ96IZ2 230 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 EAF1Q96JC9 268 aaPredicted RBP10.1□□□□□ -0.79
SYNE1-204ENST00000367248 PIGMQ9H3S5 423 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF724A8MTY0 619 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 RAG2P55895 527 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 DHRS2Q13268 280 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 FAM122CQ6P4D5 195 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 DBX2Q6ZNG2 339 aa10.1□□□□□ -0.79
SYNE1-204ENST00000367248 LTBP1Q14766 1721 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms