RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TBC1D26Q86UD7 250 aa13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 NFAM1Q8NET5 270 aaPredicted RBP13.86□□□□□ -0.19
NUCKS1-201ENST00000367142 RNF224P0DH78 156 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 DLX1P56177 255 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 PPP1R1AQ13522 171 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 TMEM37Q8WXS4 190 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 HOXD4P09016 255 aaPredicted RBP13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 PTHLHP12272 177 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 ERVFRD-1P60508 538 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 EBLN2Q6P2I7 272 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 HARBI1Q96MB7 349 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 MYH9P35579 1960 aaKnown RBP13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 CDIPTO14735 213 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 OR2H1Q9GZK4 316 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 IGHV5-10-1A0A0J9YXX1 117 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 LIPT2A6NK58 231 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 UBE2L6O14933 153 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 CDKN2AP42771 156 aaKnown RBP13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 MMDQ15546 238 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 GUCA2BQ16661 112 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 ZNF770Q6IQ21 691 aaPredicted RBP13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 WDR34Q96EX3 536 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 PPIAL4EA0A075B759 164 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 MFSD2BA6NFX1 497 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 PPIAL4DF5H284 164 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 ZNF205O95201 554 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 PPIAL4FP0DN26 164 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 SLC35E4Q6ICL7 350 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 SLC23A3Q6PIS1 610 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 LINC00596Q86U02 117 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 OR4P4Q8NGL7 312 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 DUSP15Q9H1R2 295 aaPredicted RBP13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 KCNK15Q9H427 330 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 SLC25A10Q9UBX3 287 aaPredicted RBP13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 PPIAL4AQ9Y536 164 aa13.85□□□□□ -0.19
NUCKS1-201ENST00000367142 RHBDL1O75783 438 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 TMEM183BQ1AE95 376 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 GPR35Q9HC97 309 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 LOXHD1Q8IVV2 1947 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 INHBBP09529 407 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 ACAA2P42765 397 aaKnown RBP13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 PPOXP50336 477 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 DCAF10Q5QP82 559 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 FAHD2BQ6P2I3 314 aaPredicted RBP13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 SMIM12Q96EX1 92 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 FAHD2AQ96GK7 314 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 SF3B6Q9Y3B4 125 aaKnown RBP13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 RGPD1P0DJD0 1748 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 DUXBA0A1W2PPF3 345 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 PHOX2AO14813 284 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 ATXN7O15265 892 aaPredicted RBP13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 MBPP02686 304 aaPredicted RBP13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 CTSDP07339 412 aaPredicted RBP13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 RAB32Q13637 225 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 GGTLC2Q14390 218 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 KHDC3LQ587J8 217 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 MYO10Q9HD67 2058 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 ROM1Q03395 351 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 FAM78BQ5VT40 261 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 DTD1Q8TEA8 209 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 MTFP1Q9UDX5 166 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 J3QT63 122 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 M0R2Z0 102 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 CTLA4P16410 223 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 PSG5Q15238 335 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 OR4X1Q8NH49 305 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 SNRNP40Q96DI7 357 aaKnown RBP13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 LIPGQ9Y5X9 500 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 ZFPL1O95159 310 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 MELTFP08582 738 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 FGF11Q92914 225 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 RHNO1Q9BSD3 238 aa13.84□□□□□ -0.19
NUCKS1-201ENST00000367142 DEDDO75618 318 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 SULT1A1P50225 295 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 AANATQ16613 207 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 KRTCAP3Q53RY4 240 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 C1orf174Q8IYL3 243 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 MFNGO00587 321 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 MPZL1O95297 269 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 C19orf57Q0VDD7 668 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 HIKESHIQ53FT3 197 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 C19orf54Q5BKX5 351 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 ZBTB44Q8NCP5 570 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 ZNF680Q8NEM1 530 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 PRDM14Q9GZV8 571 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 NRXN3Q9Y4C0 1643 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 COL8A1P27658 744 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 FGF8P55075 233 aaPredicted RBP13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 WDR54Q9H977 334 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 G6PCP35575 357 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 AMER3Q8N944 861 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 STXBP6Q8NFX7 210 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 COX14Q96I36 57 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 PIMREGQ9BSJ6 248 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 MYH4Q9Y623 1939 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 IGHV3OR15-7A0A075B7D8 119 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 SYNGR2O43760 224 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 CSN3P07498 182 aa13.83□□□□□ -0.2
NUCKS1-201ENST00000367142 CT62P0C5K7 136 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms