RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PTHP01270 115 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 SERPINA5P05154 406 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 CD2P06729 351 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 UCHL1P09936 223 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 GOLGA8HP0CJ92 632 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 CTSEP14091 401 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 GABRA1P14867 456 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 IMPA1P29218 277 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 PBLDP30039 288 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 RNASE4P34096 147 aaKnown RBP-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 RPL27AP46776 148 aaKnown RBP-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 PSMB2P49721 201 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 RPL10AP62906 217 aaKnown RBP-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 SEMG2Q02383 582 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 INCA1Q0VD86 236 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 TPD52L1Q16890 204 aaPredicted RBP-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 REEP3Q6NUK4 255 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 ISLR2Q6UXK2 745 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 KTN1-AS1Q86SY8 53 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 UMODL1-AS1Q8N2C9 162 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 TMCO5AQ8N6Q1 288 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 TRIML2Q8N7C3 387 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 C9orf163Q8N9P6 203 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 OR8J1Q8NGP2 316 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 OR5B3Q8NH48 314 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 GDAP1Q8TB36 358 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 PLAC4Q8WY50 150 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 AQP3Q92482 292 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 GTF2H4Q92759 462 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 YPEL4Q96NS1 127 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 QKIQ96PU8 341 aaKnown RBP eCLIP-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 MGLLQ99685 303 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 MND1Q9BWT6 205 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 ARV1Q9H2C2 271 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 LSM7Q9UK45 103 aaKnown RBP-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 NUDCQ9Y266 331 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 KNSTRNQ9Y448 316 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 FAM215AQ9Y5M1 114 aa-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 ZNF638Q14966 1978 aaKnown RBP-1.1□□□□□ -2.59
RNU6-54P-201ENST00000365563 CACNA1HO95180 2353 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 DENND4CQ5VZ89 1909 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 RIF1Q5UIP0 2472 aaKnown RBP-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 TRGV5A0A0B4J1U4 118 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 LOC107984156A0A0G2JMH3 177 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 LOC100653049A0A140TA62 436 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 SYCE3A1L190 88 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 GOLGA6L10A6NI86 522 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 SLC9B1P1A6NJY1 282 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 HMSDA8MTL9 139 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 SLC17A3O00476 420 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 SLC9A3R1O14745 358 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 INE1O15225 51 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 ORC5O43913 435 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 MPZL2O60487 215 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 SLC16A7O60669 478 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 KRT34O76011 436 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 GOSR1O95249 250 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 MT-ATP6P00846 226 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 AGTP01019 485 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 UGT2B4P06133 528 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 PGA5P0DJD9 388 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 FUT1P19526 365 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 SPRR2BP35325 72 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 MYCNOSP40205 109 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 CCNHP51946 323 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 APOFQ13790 326 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 OR1Q1Q15612 314 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 SSX1Q16384 188 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 PSMD5Q16401 504 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 NDUFAF6Q330K2 333 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 PRAMEF20Q5VT98 475 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 LAIR2Q6ISS4 152 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 PYHIN1Q6K0P9 492 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 FAM173BQ6P4H8 233 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 TMEM220Q6QAJ8 160 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 C12orf54Q6X4T0 127 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 ARL17AQ8IVW1 177 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 TMEM123Q8N131 208 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 TMEM156Q8N614 296 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 OR10W1Q8NGF6 305 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 OR10A6Q8NH74 314 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 ZNF418Q8TF45 676 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 CYGBQ8WWM9 190 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 FGF13Q92913 245 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 MAL2Q969L2 176 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 SGTBQ96EQ0 304 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 XPO4Q9C0E2 1151 aaKnown RBP-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 STMN4Q9H169 189 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 GOLPH3Q9H4A6 298 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 ANKRD19PQ9H560 264 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 SLC35D1Q9NTN3 355 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 HRASLS2Q9NWW9 162 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 ANK3Q12955 4377 aaKnown RBP-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 ANKRD11Q6UB99 2663 aaPredicted RBP-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 E9PCH4 1651 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 CADP27708 2225 aa-1.11□□□□□ -2.59
RNU6-54P-201ENST00000365563 DSCAML1Q8TD84 2053 aa-1.12□□□□□ -2.59
RNU6-54P-201ENST00000365563 CSMD3Q7Z407 3707 aa-1.12□□□□□ -2.59
RNU6-54P-201ENST00000365563 MUC4Q99102 2169 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms