RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 IGKV2-29A2NJV5 120 aaPredicted RBP1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 ERICH4A6NGS2 130 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 KNCNA6PVL3 124 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 CENPXA8MT69 81 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 ODF3BA8MYP8 253 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 H3BRN7 92 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 M0R1B8 84 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 EEF1E1O43324 174 aaKnown RBP1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 KRT34O76011 436 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 LIPCP11150 499 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 BNIP2Q12982 314 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 ATP6V1FQ16864 119 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 ACTBL2Q562R1 376 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 ACSBG2Q5FVE4 666 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 C10orf91Q5T1B1 145 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 GLYATQ6IB77 296 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR52K1Q8NGK4 314 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 B9D2Q9BPU9 175 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 ZNF251Q9BRH9 671 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 PRORYQ9H606 182 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 SLIT2O94813 1529 aa1.09□□□□□ -2.24
RNU4-28P-201ENST00000364739 PLEKHA8P1O95397 391 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 IL12BP29460 328 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 P2RY2P41231 377 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 KRTAP10-4P60372 401 aaPredicted RBP1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 CLEC12AQ5QGZ9 265 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 IDNKQ5T6J7 187 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 DUPD1Q68J44 220 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 UGT2A3Q6UWM9 527 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 SLC35D2Q76EJ3 337 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 OTUD6AQ7L8S5 288 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 OR4A5Q8NH83 315 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 CPB2Q96IY4 423 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 ADTRPQ96IZ2 230 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 IQCGQ9H095 443 aaKnown RBP1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 ARL6Q9H0F7 186 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 MFSD1Q9H3U5 465 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 LINC00588Q9Y4M8 146 aa1.08□□□□□ -2.24
RNU4-28P-201ENST00000364739 FNDC10F2Z333 226 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 TCAPO15273 167 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 GZMBP10144 247 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 PTMSP20962 102 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 IVDP26440 423 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 EVI2BP34910 448 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 CSKP41240 450 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 SPIN4Q56A73 249 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 ELP2Q6IA86 826 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 C16orf87Q6PH81 154 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 OR4C16Q8NGL9 310 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 CCL17Q92583 94 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 HIST1H2BAQ96A08 127 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 DNAJC30Q96LL9 226 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 OLFM3Q96PB7 478 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 BEX2Q9BXY8 128 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 VPREB3Q9UKI3 123 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 SLC22A14Q9Y267 594 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 PHLDA3Q9Y5J5 127 aa1.07□□□□□ -2.24
RNU4-28P-201ENST00000364739 COL18A1P39060 1754 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 A0A1W2PQL4 384 aaPredicted RBP1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 CD300LBA8K4G0 201 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 H3BP45 60 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 UPK2O00526 184 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 ETHE1O95571 254 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 GUSBP08236 651 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 PSKH1P11801 424 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 PRTN3P24158 256 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 CCT6AP40227 531 aaKnown RBP1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 MAGEA3P43357 314 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 DYNC1I2Q13409 638 aaKnown RBP1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 CEACAM16Q2WEN9 425 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 NDUFAF6Q330K2 333 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 HIKESHIQ53FT3 197 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 NXNL2Q5VZ03 156 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 TPGS1Q6ZTW0 290 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 GAPTQ8N292 157 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 ATPAF2Q8N5M1 289 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 C2orf73Q8N5S3 287 aaPredicted RBP1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 OR10P1Q8NGE3 313 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 ZNF707Q96C28 371 aaPredicted RBP1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 DDIT4LQ96D03 193 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 CENPNQ96H22 339 aaPredicted RBP1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 OR52B2Q96RD2 323 aa1.06□□□□□ -2.24
RNU4-28P-201ENST00000364739 NEURL4Q96JN8 1562 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 TRAV8-7A0A075B6U6 113 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 IGHV1-45A0A0A0MS14 117 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 RBFOX3A6NFN3 312 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 TRAPPC3O43617 180 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 GYPCP04921 128 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 GABRA4P48169 554 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 TAS2R60P59551 318 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 APOFQ13790 326 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 MUC15Q8N387 334 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 FER1L6-AS1Q8NA97 138 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 FBXO36Q8NEA4 188 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 KCNIP2Q9NS61 270 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 FAM206AQ9NX38 181 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 RPUSD1Q9UJJ7 312 aaKnown RBP1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 AP3M1Q9Y2T2 418 aa1.05□□□□□ -2.24
RNU4-28P-201ENST00000364739 OR51B4Q9Y5P0 310 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms