RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 OR6C70A6NIJ9 312 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 FAM183AA6NL82 134 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 IGLL5B9A064 214 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 RGS5O15539 181 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 TCF21O43680 179 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 TNFAIP8O95379 198 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 PFN1P07737 140 aaKnown RBP2□□□□□ -2.09
RNU6-28P-201ENST00000362378 SOD3P08294 240 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 PTHLHP12272 177 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 ZNF35P13682 527 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 CNTFRP26992 372 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 C1QTNF8P60827 252 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 PRDX1Q06830 199 aaKnown RBP2□□□□□ -2.09
RNU6-28P-201ENST00000362378 TMEM249Q2WGJ8 235 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 RBM48Q5RL73 367 aaKnown RBP2□□□□□ -2.09
RNU6-28P-201ENST00000362378 FAM162BQ5T6X4 162 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 ERICH5Q6P6B1 374 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 TMEM136Q6ZRR5 245 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 SSX7Q7RTT5 188 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 OTUD6BQ8N6M0 293 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 OR2M3Q8NG83 312 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 OLFM3Q96PB7 478 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 APOL4Q9BPW4 351 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 MED10Q9BTT4 135 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 RHOFQ9HBH0 211 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 C14orf166Q9Y224 244 aaKnown RBP2□□□□□ -2.09
RNU6-28P-201ENST00000362378 URGCP-MRPS24S4R325 110 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 ADGRL1O94910 1474 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 LRPPRCP42704 1394 aaKnown RBP1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 IGHV2-26A0A0B4J1V2 119 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 IGHV3-43A0A0B4J1X8 118 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 TRPC5OSA6NMA1 111 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 I3L4J1 428 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 M0QXV9 152 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 SULT1C2O00338 296 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 ISLRO14498 428 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 NDUFS6O75380 124 aaKnown RBP1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 IGHG2P01859 326 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 CD5P06127 495 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 SCGB1C2P0DMR2 95 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 SYT1P21579 422 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 UGT2B10P36537 528 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 PLTPP55058 493 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 PMS2P3Q13401 168 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 RAB31Q13636 194 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 ENDOGQ14249 297 aaKnown RBP1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 TMEM241Q24JQ0 296 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 TTMPQ5BVD1 217 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 USP50Q70EL3 339 aaPredicted RBP1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 TMEM144Q7Z5S9 345 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 COMTD1Q86VU5 262 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 SLC25A45Q8N413 288 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 ZIC4Q8N9L1 334 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 OR2K2Q8NGT1 345 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 OR1P1Q8NH06 330 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 OR8S1Q8NH09 359 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 SCGB1C1Q8TD33 95 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 MRAP2Q96G30 205 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 TRNT1Q96Q11 434 aaKnown RBP1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 LINC01587Q99440 93 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 ANAPC13Q9BS18 74 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 BBS2Q9BXC9 721 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 ZNF436Q9C0F3 470 aaPredicted RBP1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 VSIRQ9H7M9 311 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 TAS2R13Q9NYV9 303 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 NUP153P49790 1475 aaKnown RBP1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 ATRNO75882 1429 aa1.99□□□□□ -2.09
RNU6-28P-201ENST00000362378 MYO15BQ96JP2 1530 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 PLXNB3Q9ULL4 1909 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 H3BP45 60 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 SNAP29O95721 258 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 LIMS3P0CW19 117 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 LIMS4P0CW20 117 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 INAFM2P0DMQ5 153 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 KDELR2P33947 212 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 RPS11P62280 158 aaKnown RBP eCLIP1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 FLI1Q01543 452 aaPredicted RBP1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 GOLGA7BQ2TAP0 167 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 DGAT2L6Q6ZPD8 337 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 AMN1Q8IY45 258 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 ZNF680Q8NEM1 530 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 C1orf64Q8NEQ6 169 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 CASTOR1Q8WTX7 329 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 PDCD6IPQ8WUM4 868 aaKnown RBP1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 TWIST2Q8WVJ9 160 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 CCDC127Q96BQ5 260 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 LRRC45Q96CN5 670 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 DDIT4LQ96D03 193 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 PGLYRP3Q96LB9 341 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 TAPBPLQ9BX59 468 aa1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 TRIM45Q9H8W5 580 aaPredicted RBP1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 BAZ1BQ9UIG0 1483 aaKnown RBP1.98□□□□□ -2.09
RNU6-28P-201ENST00000362378 GPR179Q6PRD1 2367 aa1.97□□□□□ -2.09
RNU6-28P-201ENST00000362378 IGKV1OR2-108A0A075B7D4 117 aa1.97□□□□□ -2.09
RNU6-28P-201ENST00000362378 IGHV3-21A0A0B4J1V1 117 aa1.97□□□□□ -2.09
RNU6-28P-201ENST00000362378 TRAV8-2A0A0B4J237 113 aa1.97□□□□□ -2.09
RNU6-28P-201ENST00000362378 TMEM213A2RRL7 107 aa1.97□□□□□ -2.09
RNU6-28P-201ENST00000362378 VGLL3A8MV65 326 aa1.97□□□□□ -2.09
RNU6-28P-201ENST00000362378 TMEM250H0YL14 139 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms