RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 C6orf201Q7Z4U5 140 aa9.65□□□□□ -0.86
CLIP1-203ENST00000361654 ZBTB34Q8NCN2 500 aa9.65□□□□□ -0.86
CLIP1-203ENST00000361654 OR10Z1Q8NGY1 313 aa9.65□□□□□ -0.86
CLIP1-203ENST00000361654 ASCL3Q9NQ33 180 aa9.65□□□□□ -0.86
CLIP1-203ENST00000361654 ZNF205O95201 554 aa9.65□□□□□ -0.87
CLIP1-203ENST00000361654 SELENOPP49908 381 aa9.65□□□□□ -0.87
CLIP1-203ENST00000361654 CBLN3Q6UW01 205 aa9.65□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF683Q8IZ20 524 aa9.65□□□□□ -0.87
CLIP1-203ENST00000361654 YIPF6Q96EC8 236 aa9.65□□□□□ -0.87
CLIP1-203ENST00000361654 DCTN5Q9BTE1 182 aa9.65□□□□□ -0.87
CLIP1-203ENST00000361654 GPR27Q9NS67 375 aa9.65□□□□□ -0.87
CLIP1-203ENST00000361654 TMEM38BQ9NVV0 291 aa9.65□□□□□ -0.87
CLIP1-203ENST00000361654 NRAPQ86VF7 1730 aa9.65□□□□□ -0.87
CLIP1-203ENST00000361654 STPG3Q8N7X2 389 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 SS18L1O75177 396 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-203ENST00000361654 PEX11BO96011 259 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 HOXB1P14653 301 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-203ENST00000361654 DAOP14920 347 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 CTLA4P16410 223 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 RPS4Y1P22090 263 aaKnown RBP9.64□□□□□ -0.87
CLIP1-203ENST00000361654 CDC34P49427 236 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-203ENST00000361654 SUMO1P63165 101 aaKnown RBP9.64□□□□□ -0.87
CLIP1-203ENST00000361654 TMEM97Q5BJF2 176 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 LYRM7Q5U5X0 104 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 MDP1Q86V88 176 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF547Q8IVP9 402 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 COMMD1Q8N668 190 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 DUSP21Q9H596 190 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 NAA60Q9H7X0 242 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 NQO2P16083 231 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 DCTDP32321 178 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 SP6Q3SY56 376 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 COL13A1Q5TAT6 717 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF770Q6IQ21 691 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-203ENST00000361654 CALHM1Q8IU99 346 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF714Q96N38 554 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 GSX2Q9BZM3 304 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 ECM29Q5VYK3 1845 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 FAM181BA6NEQ2 426 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 FOXH1O75593 365 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 GYPAP02724 150 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 C1QBP02746 253 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 CD40P25942 277 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 UQCRFS1P47985 274 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 CCL8P80075 99 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 FAM106AQ4KMX7 169 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 TMEM116Q8NCL8 245 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 ANGPTL6Q8NI99 470 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 TMEM18Q96B42 140 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 RAX2Q96IS3 184 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 GLI3P10071 1580 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 CT62P0C5K7 136 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 PMELP40967 661 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 GFRA1P56159 465 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF519Q8TB69 540 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 PPP1R1CQ8WVI7 109 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 TNFRSF12AQ9NP84 129 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 PARP11Q9NR21 331 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 ZDHHC8Q9ULC8 765 aa9.64□□□□□ -0.87
CLIP1-203ENST00000361654 CACNA1SQ13698 1873 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 WNT9BO14905 357 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 GABRB1P18505 474 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 MC5RP33032 325 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 FAAP20Q6NZ36 180 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 C17orf47Q8NEP4 570 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 STARD4Q96DR4 205 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 MARS2Q96GW9 593 aaKnown RBP9.63□□□□□ -0.87
CLIP1-203ENST00000361654 ABHD14AQ9BUJ0 271 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 SRRQ9GZT4 340 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 MIOXQ9UGB7 285 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 PILRBQ9UKJ0 227 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 SMAD7O15105 426 aaKnown RBP9.63□□□□□ -0.87
CLIP1-203ENST00000361654 FAM87AP0C7U9 286 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 SLC37A1P57057 533 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 YBX1P67809 324 aaKnown RBP9.63□□□□□ -0.87
CLIP1-203ENST00000361654 RNF212Q495C1 297 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 C12orf73Q69YU5 71 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 MAMSTRQ6ZN01 415 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 OR8B12Q8NGG6 310 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 ZNF418Q8TF45 676 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-203ENST00000361654 WIPI2Q9Y4P8 454 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 MMP15P51511 669 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 RAE1P78406 368 aaKnown RBP9.63□□□□□ -0.87
CLIP1-203ENST00000361654 FDX2Q6P4F2 183 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 RNF165Q6ZSG1 346 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 JMJD8Q96S16 334 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 SFXN3Q9BWM7 321 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 OPN3Q9H1Y3 402 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-203ENST00000361654 MSL2Q9HCI7 577 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 A0A1B0GUL6 1792 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 FAM24AA6NFZ4 105 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 WNT1P04628 370 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 FGF5P12034 268 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 NHLH1Q02575 133 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 NHLH2Q02577 135 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 TMEM251Q8N6I4 163 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 OR52M1Q8NGK5 317 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 ORAI1Q96D31 301 aa9.63□□□□□ -0.87
CLIP1-203ENST00000361654 IGHV4-34P06331 123 aa9.62□□□□□ -0.87
CLIP1-203ENST00000361654 CEACAM1P13688 526 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms