RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 VAX1Q5SQQ9 334 aa17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 SUMF2Q8NBJ7 301 aa17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 ITLN1Q8WWA0 313 aa17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 RANGRFQ9HD47 186 aaPredicted RBP17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 C12orf4Q9NQ89 552 aa17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 RASL12Q9NYN1 266 aa17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 ZNF230Q9UIE0 474 aaPredicted RBP17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 ANKHD1Q8IWZ3 2542 aaKnown RBP17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 ADGRG4Q8IZF6 3080 aa17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 ASH1LQ9NR48 2969 aaKnown RBP17.71■□□□□ 0.43
MAP1LC3A-201ENST00000360668 TRAV24A0A0B4J272 114 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 hCG_1807616A0A1W2PRN6 198 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SIAH2O43255 324 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 GLRA1P23415 457 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 APOBEC3AP31941 199 aaPredicted RBP17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 MICBQ29980 383 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 ACP7Q6ZNF0 438 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SLC36A1Q7Z2H8 476 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 LRRC29Q8WV35 223 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 DYRK2Q92630 601 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 ERGIC1Q969X5 290 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SLC6A7Q99884 636 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 GLS2Q9UI32 602 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 DEFB108AA8MXU0 73 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 C3orf80F5H4A9 247 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SH2D1BO14796 132 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 PMP2P02689 132 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CD55P08174 381 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 ZNF44P15621 663 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 LOXP28300 417 aaPredicted RBP17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CD83Q01151 205 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 RBM39Q14498 530 aaKnown RBP17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 FCN2Q15485 313 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 EFNB3Q15768 340 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SMIM21Q3B7S5 101 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 OR5H2Q8NGV7 314 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 NEUROG1Q92886 237 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 TMEM204Q9BSN7 226 aa17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 DPCDQ9BVM2 203 aaPredicted RBP17.7■□□□□ 0.42
MAP1LC3A-201ENST00000360668 C17orf100A8MU93 164 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SRRM5B3KS81 715 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 M0R233 179 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 WNT9BO14905 357 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 OR2H2O95918 312 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 KNG1P01042 644 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 IFNA6P05013 189 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SULT1A3P0DMM9 295 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SULT1A4P0DMN0 295 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 GMFBP60983 142 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CBX3Q13185 183 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 MOGAT3Q86VF5 341 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 FAM90A1Q86YD7 464 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 OR5AP2Q8NGF4 316 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CCDC107Q8WV48 283 aa17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 RIMS4Q9H426 269 aaPredicted RBP17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CHD3Q12873 2000 aaKnown RBP17.69■□□□□ 0.42
MAP1LC3A-201ENST00000360668 PLAUP00749 431 aa17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SRSF7Q16629 238 aaKnown RBP eCLIP17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SPRNQ5BIV9 151 aa17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SHEQ5VZ18 495 aa17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 IDO2Q6ZQW0 420 aa17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 ARRDC1Q8N5I2 433 aa17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 MAFIPQ8WZ33 124 aa17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 FYTTD1Q96QD9 318 aaKnown RBP17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 DHRS9Q9BPW9 319 aa17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 WDR13Q9H1Z4 485 aa17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 ANXA10Q9UJ72 324 aa17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 FLNBO75369 2602 aaKnown RBP17.68■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CLEC18AA5D8T8 446 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 B9A039 149 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SLC33A1O00400 549 aaPredicted RBP17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 HS3ST1O14792 307 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 HAND1O96004 215 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 NAPSAO96009 420 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 C1QBP02746 253 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 HPXP02790 462 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CSN2P05814 226 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 MDH2P40926 338 aaKnown RBP17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 OR3A3P47888 321 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SRSF1Q07955 248 aaKnown RBP eCLIP17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CHRFAM7AQ494W8 412 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 ZNF672Q499Z4 452 aaPredicted RBP17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 FAM209AQ5JX71 171 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CLEC18BQ6UXF7 455 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 Q6ZS49 121 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 NOXA1Q86UR1 476 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SPICQ8N5J4 248 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CLEC18CQ8NCF0 446 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 Q8TCH9 128 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 NEK7Q8TDX7 302 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 RDH5Q92781 318 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 PIK3IP1Q96FE7 263 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CISD1Q9NZ45 108 aaKnown RBP17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 TREM2Q9NZC2 230 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 ICE1Q9Y2F5 2266 aa17.67■□□□□ 0.42
MAP1LC3A-201ENST00000360668 A8MV72 311 aaPredicted RBP17.66■□□□□ 0.42
MAP1LC3A-201ENST00000360668 SSNA1O43805 119 aa17.66■□□□□ 0.42
MAP1LC3A-201ENST00000360668 CREBL2O60519 120 aaPredicted RBP17.66■□□□□ 0.42
MAP1LC3A-201ENST00000360668 LHBP01229 141 aa17.66■□□□□ 0.42
MAP1LC3A-201ENST00000360668 LMO1P25800 156 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms