RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ZNF77Q15935 545 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 C19orf54Q5BKX5 351 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 FOXB2Q5VYV0 432 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 B9D1Q9UPM9 204 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 CDC14BO60729 498 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 FAM27D1Q5T7N8 215 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 TCRBV5S2A0A599 114 aa8.29□□□□□ -1.08
VPS13A-203ENST00000360280 CRYABP02511 175 aaKnown RBP8.28□□□□□ -1.08
VPS13A-203ENST00000360280 TCTN1Q2MV58 587 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 RIMKLAQ8IXN7 391 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 PDLIM7Q9NR12 457 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 A0A087WUJ7 227 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 SPATA46Q5T0L3 261 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 C16orf52Q8NHV5 167 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 MED29Q9NX70 200 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 XIRP1Q702N8 1843 aaKnown RBP8.28□□□□□ -1.08
VPS13A-203ENST00000360280 CBLN2Q8IUK8 224 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 ERRFI1Q9UJM3 462 aaPredicted RBP8.28□□□□□ -1.08
VPS13A-203ENST00000360280 IGHV3-15A0A0B4J1V0 119 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 PWWP2BQ6NUJ5 590 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 LINC00052Q96N35 136 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 ANK1P16157 1881 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 PCP4P48539 62 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 GNG10P50151 68 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 LGALSLQ3ZCW2 172 aaPredicted RBP8.28□□□□□ -1.08
VPS13A-203ENST00000360280 FGF17O60258 216 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 PARP11Q9NR21 331 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 COL16A1Q07092 1604 aaPredicted RBP8.28□□□□□ -1.08
VPS13A-203ENST00000360280 FAM53BQ14153 422 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 ID1P41134 155 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 BAHD1Q8TBE0 780 aaPredicted RBP8.28□□□□□ -1.08
VPS13A-203ENST00000360280 GUCD1Q96NT3 240 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 WNT1P04628 370 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 DPTQ07507 201 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 LHFPL5Q8TAF8 219 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 WFIKKN1Q96NZ8 548 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 A0A1W2PNR3 127 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 NPIPB6E9PJ23 425 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 PSG5Q15238 335 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 OR2V1Q8NHB1 315 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 CTDSPLO15194 276 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 KLF3P57682 345 aaPredicted RBP8.28□□□□□ -1.08
VPS13A-203ENST00000360280 SLC25A30Q5SVS4 291 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 PTX4Q96A99 478 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 SGK494Q96LW2 274 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 SOCS7O14512 581 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 ALKBH3Q96Q83 286 aaPredicted RBP8.28□□□□□ -1.08
VPS13A-203ENST00000360280 IL20Q9NYY1 176 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 NCKAP5O14513 1909 aa8.28□□□□□ -1.08
VPS13A-203ENST00000360280 PDCD6O75340 191 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 TMEM52BQ4KMG9 183 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 ZNF683Q8IZ20 524 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 BEND2Q8NDZ0 799 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 NEURL2Q9BR09 285 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 SLIRPQ9GZT3 109 aaKnown RBP8.27□□□□□ -1.08
VPS13A-203ENST00000360280 DLEC1Q9Y238 1755 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 RNF224P0DH78 156 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 CD27P26842 260 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 KCNAB1Q14722 419 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 COL19A1Q14993 1142 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 PABPC1L2AQ5JQF8 200 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 WDFY1Q8IWB7 410 aa8.27□□□□□ -1.08
VPS13A-203ENST00000360280 H3BQ15 152 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 SLC25A1P53007 311 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 FAM209BQ5JX69 171 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 LRRC75AQ8NAA5 344 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 VN1R2Q8NFZ6 395 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 OR4P4Q8NGL7 312 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF296Q8WUU4 475 aaPredicted RBP8.27□□□□□ -1.09
VPS13A-203ENST00000360280 R3HDM4Q96D70 268 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 GAB4Q2WGN9 574 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 MORN1Q5T089 497 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 BTLAQ7Z6A9 289 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 MRPL43Q8N983 215 aaKnown RBP8.27□□□□□ -1.09
VPS13A-203ENST00000360280 COA4Q9NYJ1 87 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 YLPM1P49750 1951 aaKnown RBP8.27□□□□□ -1.09
VPS13A-203ENST00000360280 SPRY3O43610 288 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 PRSS36Q5K4E3 855 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 SYT8Q8NBV8 401 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 STARD10Q9Y365 291 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 CABIN1Q9Y6J0 2220 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 HLA-DQA1P01909 254 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 TMEM255AQ5JRV8 349 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 RLN3Q8WXF3 142 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 DEFB127Q9H1M4 99 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 MRPL54Q6P161 138 aaKnown RBP8.27□□□□□ -1.09
VPS13A-203ENST00000360280 OR8I2Q8N0Y5 310 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 GMPPAQ96IJ6 420 aaPredicted RBP8.27□□□□□ -1.09
VPS13A-203ENST00000360280 PMCHL2Q9BQD1 86 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 VSIG4Q9Y279 399 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 H1FOOQ8IZA3 346 aaPredicted RBP8.27□□□□□ -1.09
VPS13A-203ENST00000360280 RTTNQ86VV8 2226 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 PLXNB2O15031 1838 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 MZB1Q8WU39 189 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 OR2V2Q96R30 315 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 FGF14Q92915 247 aa8.27□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF764Q96H86 408 aaPredicted RBP8.27□□□□□ -1.09
VPS13A-203ENST00000360280 PLEKHB1Q9UF11 243 aaPredicted RBP8.27□□□□□ -1.09
VPS13A-203ENST00000360280 KMT5CQ86Y97 462 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms