RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 DNM1P46Q6ZS02 220 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 CALHM1Q8IU99 346 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 OR2G3Q8NGZ4 309 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 TMEM230Q96A57 120 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 ERRFI1Q9UJM3 462 aaPredicted RBP9.68□□□□□ -0.86
SSU72-202ENST00000359060 FOXD3Q9UJU5 478 aaPredicted RBP9.68□□□□□ -0.86
SSU72-202ENST00000359060 OSGIN2Q9Y236 505 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 EML5Q05BV3 1969 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 MED13Q9UHV7 2174 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 C3orf85A0A1B0GTC6 90 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 ZNF716A6NP11 495 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 C9orf172C9J069 976 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 CHATP28329 748 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 OR8G1Q15617 311 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 FAM58AQ8N1B3 248 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 DEFB124Q8NES8 71 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 OR1J1Q8NGS3 322 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 PRSS50Q9UI38 385 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 PUS1Q9Y606 427 aaKnown RBP eCLIP9.68□□□□□ -0.86
SSU72-202ENST00000359060 KCNMB2Q9Y691 235 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 FAM24AA6NFZ4 105 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 GLAP06280 429 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 CTSSP25774 331 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 FOXG1P55316 489 aaPredicted RBP9.68□□□□□ -0.86
SSU72-202ENST00000359060 POLR2GP62487 172 aaKnown RBP eCLIP9.68□□□□□ -0.86
SSU72-202ENST00000359060 PJVKQ0ZLH3 352 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 TRIP6Q15654 476 aaKnown RBP9.68□□□□□ -0.86
SSU72-202ENST00000359060 LIAT1Q6ZQX7 453 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 PROK2Q9HC23 129 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 ZNF581Q9P0T4 197 aa9.68□□□□□ -0.86
SSU72-202ENST00000359060 TMEM218A2RU14 115 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 CTXN2P0C2S0 81 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 OR13C7P0DN81 318 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 CFPP27918 469 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 GABRA2P47869 451 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 CLCC1Q96S66 551 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 RNF150Q9ULK6 438 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 H0YIZ8 118 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 ADAM20O43506 726 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 SP9P0CG40 484 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 GPR157Q5UAW9 335 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 SHEQ5VZ18 495 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 GGNQ86UU5 652 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 CPEB3Q8NE35 698 aaKnown RBP9.67□□□□□ -0.86
SSU72-202ENST00000359060 OR8U1Q8NH10 309 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 FZR1Q9UM11 496 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 SYNGR1O43759 233 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 F2RL1P55085 397 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 SOX8P57073 446 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 EDDM3AQ14507 147 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 ZNF266Q14584 549 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 NUFIP2Q7Z417 695 aaKnown RBP9.67□□□□□ -0.86
SSU72-202ENST00000359060 GAPTQ8N292 157 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 ZNF808Q8N4W9 903 aaPredicted RBP9.67□□□□□ -0.86
SSU72-202ENST00000359060 FAM89BQ8N5H3 189 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 ZC3H10Q96K80 434 aaKnown RBP9.67□□□□□ -0.86
SSU72-202ENST00000359060 CCL28Q9NRJ3 127 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 hCG_38984A0A1B0GV85 526 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 FGF2P09038 288 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 DEFB109BQ30KR1 87 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 TBC1D26Q86UD7 250 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 ZFP62Q8NB50 900 aaPredicted RBP9.67□□□□□ -0.86
SSU72-202ENST00000359060 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 AKR1E2Q96JD6 320 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 TM2D1Q9BX74 207 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 LPAR3Q9UBY5 353 aa9.67□□□□□ -0.86
SSU72-202ENST00000359060 RNASEK-C17orf49H0YIS7 233 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 MPPED1O15442 326 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 ATG12O94817 140 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 SCTP09683 121 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 ZNF14P17017 642 aaPredicted RBP9.66□□□□□ -0.86
SSU72-202ENST00000359060 MIDNQ504T8 468 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 FAM122CQ6P4D5 195 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 DDA1Q9BW61 102 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 ZNF703Q9H7S9 590 aaPredicted RBP9.66□□□□□ -0.86
SSU72-202ENST00000359060 MMP26Q9NRE1 261 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 WASF3Q9UPY6 502 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 POLDIP2Q9Y2S7 368 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 TMED3Q9Y3Q3 217 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 ADAMTS9Q9P2N4 1935 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 SPAARA0A1B0GVQ0 90 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 TERTO14746 1132 aaKnown RBP9.66□□□□□ -0.86
SSU72-202ENST00000359060 CD37P11049 281 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 HGFACQ04756 655 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 TMEM211Q6ICI0 200 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 MDP1Q86V88 176 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 ZFP82Q8N141 532 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 SLC35G3Q8N808 338 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 SUMF2Q8NBJ7 301 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 OR10Z1Q8NGY1 313 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 C1orf147Q96MC9 270 aaPredicted RBP9.66□□□□□ -0.86
SSU72-202ENST00000359060 RNF126Q9BV68 326 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 HEATR1Q9H583 2144 aaKnown RBP9.66□□□□□ -0.86
SSU72-202ENST00000359060 RAB19A4D1S5 217 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 NKX2-6A6NCS4 301 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 ZNF806P0C7X5 589 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 IAPPP10997 89 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 SFT2D1Q8WV19 159 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 PLPPR2Q96GM1 343 aa9.66□□□□□ -0.86
SSU72-202ENST00000359060 PLK3Q9H4B4 646 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms