RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 SSX7Q7RTT5 188 aa10.02□□□□□ -0.8
CNOT3-202ENST00000358389 RBMXL1Q96E39 390 aaKnown RBP10.02□□□□□ -0.8
CNOT3-202ENST00000358389 SMIM10Q96HG1 83 aa10.02□□□□□ -0.8
CNOT3-202ENST00000358389 NUP210Q8TEM1 1887 aaPredicted RBP10.02□□□□□ -0.8
CNOT3-202ENST00000358389 TRBV11-1A0A0K0K1C0 115 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 CD55P08174 381 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 METTL15P1P0C7V9 234 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 CD33P20138 364 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 GALR1P47211 349 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 PPP1CAP62136 330 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 ARL6IP1Q15041 203 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 LHFPL1Q86WI0 220 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 SLC38A9Q8NBW4 561 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 ZNF524Q96C55 264 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 LIN37Q96GY3 246 aaPredicted RBP10.02□□□□□ -0.81
CNOT3-202ENST00000358389 ACTR3CQ9C0K3 210 aaPredicted RBP10.02□□□□□ -0.81
CNOT3-202ENST00000358389 B4DEV8 164 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 RPL36A-HNRNPH2H7BZ11 118 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 AQP7O14520 342 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 ZNF154Q13106 437 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 TRA2AQ13595 282 aaKnown RBP eCLIP10.02□□□□□ -0.81
CNOT3-202ENST00000358389 LYSMD4Q5XG99 296 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 SPSB3Q6PJ21 355 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 C16orf82Q7Z2V1 217 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 C11orf42Q8N5U0 333 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 TSLPQ969D9 159 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 BMFQ96LC9 184 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 LRRC3BQ96PB8 259 aa10.02□□□□□ -0.81
CNOT3-202ENST00000358389 DUSP15Q9H1R2 295 aaPredicted RBP10.02□□□□□ -0.81
CNOT3-202ENST00000358389 NKX2-6A6NCS4 301 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 CRYM-AS1A6NIL9 109 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 QRFPP83859 136 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 C1QL2Q7Z5L3 287 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 DEFB123Q8N688 67 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 DYRK2Q92630 601 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 GNPNAT1Q96EK6 184 aaPredicted RBP10.01□□□□□ -0.81
CNOT3-202ENST00000358389 SIT1Q9Y3P8 196 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 HSPB6O14558 160 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 ISG15P05161 165 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 CDAP32320 146 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 DRD3P35462 400 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 FASLGP48023 281 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 BIDP55957 195 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 PDCD1Q15116 288 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 ZNF100Q8IYN0 542 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 IL1F10Q8WWZ1 152 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 TM4SF19Q96DZ7 209 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 HINT2Q9BX68 163 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 WWTR1Q9GZV5 400 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 PTRH2Q9Y3E5 179 aaKnown RBP10.01□□□□□ -0.81
CNOT3-202ENST00000358389 SHANK1Q9Y566 2161 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 GPR179Q6PRD1 2367 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 ABCA1O95477 2261 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 A0A1W2PR80 420 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 ANGPTL7O43827 346 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 OR7C1O76099 320 aaPredicted RBP10.01□□□□□ -0.81
CNOT3-202ENST00000358389 IRF2P14316 349 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 IL11P20809 199 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 DAP3P51398 398 aaKnown RBP10.01□□□□□ -0.81
CNOT3-202ENST00000358389 ZNF121P58317 390 aaPredicted RBP10.01□□□□□ -0.81
CNOT3-202ENST00000358389 KISS1Q15726 138 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 TMEM41BQ5BJD5 291 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 ZNF506Q5JVG8 444 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 FBXL14Q8N1E6 418 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 ZNF321PQ8N8H1 164 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 DIRC2Q96SL1 478 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 GPHA2Q96T91 129 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 PLEKHF2Q9H8W4 249 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 IGSF23A1L1A6 192 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 UCP2P55851 309 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 RPS18P62269 152 aaKnown RBP10.01□□□□□ -0.81
CNOT3-202ENST00000358389 PNRC1Q12796 327 aaPredicted RBP10.01□□□□□ -0.81
CNOT3-202ENST00000358389 LIAT1Q6ZQX7 453 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 CLDND2Q8NHS1 167 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 NAGKQ9UJ70 344 aa10.01□□□□□ -0.81
CNOT3-202ENST00000358389 EML5Q05BV3 1969 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 IGKV1D-43A0A0B4J1Z2 117 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 OTOL1A6NHN0 477 aaPredicted RBP10□□□□□ -0.81
CNOT3-202ENST00000358389 P04436 131 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 ZNF92Q03936 586 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 CCNL2Q96S94 520 aaPredicted RBP10□□□□□ -0.81
CNOT3-202ENST00000358389 RPP25Q9BUL9 199 aaKnown RBP10□□□□□ -0.81
CNOT3-202ENST00000358389 PLK3Q9H4B4 646 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 SLC2A9Q9NRM0 540 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 NECAP2Q9NVZ3 263 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 CACNA1HO95180 2353 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 A0A1W2PNV4 684 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 M0QZK8 103 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 GGCTO75223 188 aaKnown RBP10□□□□□ -0.81
CNOT3-202ENST00000358389 HPRT1P00492 218 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 CD82P27701 267 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 MSX1P28360 303 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 PTTG1IPP53801 180 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 SFTPA2Q8IWL1 248 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 TMEM252Q8N6L7 170 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 CCDC74BQ96LY2 380 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 SRD5A3Q9H8P0 318 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 DNAJC4Q9NNZ3 241 aa10□□□□□ -0.81
CNOT3-202ENST00000358389 ANXA10Q9UJ72 324 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms