RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 UCNP55089 124 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 TMEM183BQ1AE95 376 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 OR2T27Q8NH04 317 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 SUN3Q8TAQ9 357 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 UBE2E3Q969T4 207 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 APH1AQ96BI3 265 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 ARHGDIGQ99819 225 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 ALG12Q9BV10 488 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 VAMP8Q9BV40 100 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 B4DEV8 164 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 WDR1O75083 606 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 HIST1H1TP22492 207 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 GRPRP30550 384 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 HINT1P49773 126 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 SCAND1P57086 179 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 ERVS71-1P61550 626 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 RANP62826 216 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 LASP1Q14847 261 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 RAB11BQ15907 218 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 NNATQ16517 81 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 SHISA6Q6ZSJ9 500 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 MDGA2Q7Z553 956 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 IL22RA1Q8N6P7 574 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 STXBP6Q8NFX7 210 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 OR52L1Q8NGH7 329 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 SLC2A12Q8TD20 617 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 NICN1Q9BSH3 213 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 DUSP23Q9BVJ7 150 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 TMEM106BQ9NUM4 274 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 P4HTMQ9NXG6 502 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 STRAPQ9Y3F4 350 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 MGAQ8IWI9 3026 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 PCNX2A6NKB5 2137 aa8.12□□□□□ -1.11
SMARCAL1-202ENST00000358207 TNFRSF10CO14798 259 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 MPZL1O95297 269 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 DUSP3P51452 185 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 RHOGP84095 191 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 SP5Q6BEB4 398 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 ABHD17CQ6PCB6 329 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 ZNF584Q8IVC4 421 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 MCEMP1Q8IX19 187 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 SLC25A45Q8N413 288 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 NECAP1Q8NC96 275 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 TMEM52Q8NDY8 209 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 ADAMTS15Q8TE58 950 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 OR5P2Q8WZ92 322 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 CCDC74AQ96AQ1 378 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 SLC41A2Q96JW4 573 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 ADOQ96SZ5 270 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 C5orf66Q9H5L9 145 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 ELL3Q9HB65 397 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 AHSPQ9NZD4 102 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 LRIT1Q9P2V4 623 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 CLN8Q9UBY8 286 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 SLC45A2Q9UMX9 530 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 HEBP2Q9Y5Z4 205 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 IGHV5-51A0A0C4DH38 117 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 TRBV5-5A0A0J9YX44 114 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 CLEC18AA5D8T8 446 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 SERPINE3A8MV23 424 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 HRH1P35367 487 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 BLKP51451 505 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 PLAURQ03405 335 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 CNN3Q15417 329 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 CST9LP1Q5W188 147 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 FAM90A2PQ658T7 463 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 CLEC18CQ8NCF0 446 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 OR2M7Q8NG81 312 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 FLVCR1-AS1Q8TAF5 88 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 VN1R17PQ8TDU5 208 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 FAM216AQ8WUB2 273 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 RERGQ96A58 199 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 WDR34Q96EX3 536 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 CNRIP1Q96F85 164 aaPredicted RBP8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 REEP6Q96HR9 211 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 PELI2Q9HAT8 420 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 ZCCHC3Q9NUD5 404 aaKnown RBP8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 FRRS1LQ9P0K9 344 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 SMPXQ9UHP9 88 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 GTF2A1LQ9UNN4 478 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 CEP295Q9C0D2 2601 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 TRAV27A0A087WT01 109 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 TRAV34A0A0B4J273 112 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 LILRA1O75019 489 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 SFT2D2O95562 160 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 JMJD7P0C870 316 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 STAG3L3P0CL85 134 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 RAB38P57729 211 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 SQSTM1Q13501 440 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 SNAI3Q3KNW1 292 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 FAM69BQ5VUD6 431 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 PRR27Q6MZM9 219 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 PLXDC2Q6UX71 529 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 OOSP2Q86WS3 158 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 OR2A5Q96R48 311 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 LPAR4Q99677 370 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 MCHR1Q99705 422 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 PRSS27Q9BQR3 290 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 GLIPR2Q9H4G4 154 aa8.11□□□□□ -1.11
SMARCAL1-202ENST00000358207 BCL2L10Q9HD36 194 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms