RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 MRPL3P09001 348 aaKnown RBP12.38□□□□□ -0.43
IFT20-202ENST00000357896 OR8U8P0C7N1 319 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 PRKACAP17612 351 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 NFYBP25208 207 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 PRDX6P30041 224 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 NPBWR2P48146 333 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 VEGFCP49767 419 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 GK3PQ14409 553 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 HAVCR2Q8TDQ0 301 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 TM2D3Q9BRN9 247 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 ABCG5Q9H222 651 aa12.38□□□□□ -0.43
IFT20-202ENST00000357896 EXOSC4Q9NPD3 245 aaKnown RBP12.38□□□□□ -0.43
IFT20-202ENST00000357896 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
IFT20-202ENST00000357896 SORL1Q92673 2214 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 LDLRAD4O15165 306 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 OR2H2O95918 312 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 CCL1P22362 96 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 SPATS1Q496A3 300 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 ZNF322Q6U7Q0 402 aaPredicted RBP12.37□□□□□ -0.43
IFT20-202ENST00000357896 ZNF565Q8N9K5 539 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 TTTY10Q9BZA0 68 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 CHST5Q9GZS9 411 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 MAGIXQ9H6Y5 334 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 OR6C3Q9NZP0 311 aa12.37□□□□□ -0.43
IFT20-202ENST00000357896 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 MPZL2O60487 215 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 IGHG4P01861 327 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 CSN2P05814 226 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 BCL3P20749 454 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 VDAC1P21796 283 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 RBP2P50120 134 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 ATP1B3P54709 279 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 SNU13P55769 128 aaKnown RBP12.36□□□□□ -0.43
IFT20-202ENST00000357896 BNIP1Q12981 228 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 EBI3Q14213 229 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 C17orf58Q2M2W7 97 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 KRBOX4Q5JUW0 171 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 PGAM4Q8N0Y7 254 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 CCDC54Q8NEL0 328 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 OR1N2Q8NGR9 330 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 GIPC3Q8TF64 312 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 KIRREL1Q96J84 757 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 APOL4Q9BPW4 351 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 HMG20AQ9NP66 347 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 COPS3Q9UNS2 423 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 GSTK1Q9Y2Q3 226 aa12.36□□□□□ -0.43
IFT20-202ENST00000357896 SYT7O43581 403 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 CALCBP10092 127 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 GP9P14770 177 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 CXCR4P61073 352 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 CDK5Q00535 292 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 ZNF616Q08AN1 781 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 UTF1Q5T230 341 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 C16orf89Q6UX73 402 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 CYP2R1Q6VVX0 501 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 CHST4Q8NCG5 386 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 DNAAF1Q8NEP3 725 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 CNN2Q99439 309 aaKnown RBP12.35□□□□□ -0.43
IFT20-202ENST00000357896 MNTQ99583 582 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 ADI1Q9BV57 179 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 ISYNA1Q9NPH2 558 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 ACTR3BQ9P1U1 418 aa12.35□□□□□ -0.43
IFT20-202ENST00000357896 HYDINQ4G0P3 5121 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 SAP30O75446 220 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 OR5H8P0DN80 308 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 OSMP13725 252 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 SPNP16150 400 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 PSMB8P28062 276 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 POU3F4P49335 361 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 MTCP1P56278 107 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 CFHR3Q02985 330 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 SLC16A12Q6ZSM3 486 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 OR10X1Q8NGY0 326 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 OR2T10Q8NGZ9 312 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 PP6455Q8WZ26 134 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 C10orf35Q96D05 121 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 EAF1Q96JC9 268 aaPredicted RBP12.34□□□□□ -0.43
IFT20-202ENST00000357896 UBE2E2Q96LR5 201 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 RASL11BQ9BPW5 248 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 ING3Q9NXR8 418 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 PSG11Q9UQ72 335 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 KIAA2026Q5HYC2 2103 aa12.34□□□□□ -0.43
IFT20-202ENST00000357896 GAPDHP04406 335 aaKnown RBP12.33□□□□□ -0.44
IFT20-202ENST00000357896 ZNF44P15621 663 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 C21orf33P30042 268 aaPredicted RBP12.33□□□□□ -0.44
IFT20-202ENST00000357896 RUNX1Q01196 453 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 SCN1BQ07699 218 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 DIAPH2-AS1Q14236 149 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 ODF4Q2M2E3 257 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 FAM98BQ52LJ0 330 aaKnown RBP12.33□□□□□ -0.44
IFT20-202ENST00000357896 TMEM65Q6PI78 240 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 PLEKHG7Q6ZR37 379 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 MOB3BQ86TA1 216 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 FAM71E2Q8N5Q1 922 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 OR6Q1Q8NGQ2 317 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 COQ2Q96H96 371 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 CHCHD6Q9BRQ6 235 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 COMMD4Q9H0A8 199 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 GHITMQ9H3K2 345 aa12.33□□□□□ -0.44
IFT20-202ENST00000357896 ZNF556Q9HAH1 456 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms