RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 UXS1Q8NBZ7 420 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 OR4M1Q8NGD0 313 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 CD300LFQ8TDQ1 290 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 C10orf105Q8TEF2 133 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 LYZL4Q96KX0 146 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 SPIN2AQ99865 258 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 SPIN2BQ9BPZ2 258 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 PLEKHF2Q9H8W4 249 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 ZFP57Q9NU63 452 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 SIGLEC5O15389 551 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 SSNA1O43805 119 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 B3GALNT1O75752 331 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 SOD3P08294 240 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 CDK2P24941 298 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 RPS16P62249 146 aaKnown RBP7.75□□□□□ -1.17
UPF2-202ENST00000357604 CDK10Q15131 360 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 SLC16A12Q6ZSM3 486 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 OR9G1Q8NH87 305 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 ZNRF4Q8WWF5 429 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 SLC6A7Q99884 636 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 HIF1ANQ9NWT6 349 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 K7N7A8 449 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 WISP2O76076 250 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 NTF4P34130 210 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 ZNF362Q5T0B9 420 aaPredicted RBP7.75□□□□□ -1.17
UPF2-202ENST00000357604 ELP2Q6IA86 826 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 SLC25A24Q6NUK1 477 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 CNIH2Q6PI25 160 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 DMBX1Q8NFW5 382 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 OR4A16Q8NH70 328 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 RPS4Y2Q8TD47 263 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 ZNF75AQ96N20 296 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 NICN1Q9BSH3 213 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 CEACAM18A8MTB9 384 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 HPGDSO60760 199 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 CNIH1O95406 144 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 RLN2P04090 185 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 DTYMKP23919 212 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 PMELP40967 661 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 GNG10P50151 68 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 KNL1Q8NG31 2342 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 DMRTB1Q96MA1 342 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 SRRM5B3KS81 715 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 J3QRE1 110 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 THBS3P49746 956 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 CAV3P56539 151 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 EFNB1P98172 346 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 LOXL1Q08397 574 aaPredicted RBP7.75□□□□□ -1.17
UPF2-202ENST00000357604 SLC38A6Q8IZM9 456 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 TCTEX1D2Q8WW35 142 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 NRIP2Q9BQI9 281 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 NUP50Q9UKX7 468 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 LSM2Q9Y333 95 aaKnown RBP7.75□□□□□ -1.17
UPF2-202ENST00000357604 A3GALT2U3KPV4 340 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 KNTC1P50748 2209 aa7.75□□□□□ -1.17
UPF2-202ENST00000357604 FAM240BA0A1B0GVZ2 78 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 NCBP2LA6PVI3 153 aaKnown RBP7.74□□□□□ -1.17
UPF2-202ENST00000357604 GEMIN2O14893 280 aaKnown RBP7.74□□□□□ -1.17
UPF2-202ENST00000357604 XRCC3O43542 346 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 GNB3P16520 340 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 HTR1DP28221 377 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 ERP29P30040 261 aaKnown RBP7.74□□□□□ -1.17
UPF2-202ENST00000357604 AKR1C2P52895 323 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 GP2P55259 537 aaKnown RBP7.74□□□□□ -1.17
UPF2-202ENST00000357604 C1orf100Q5SVJ3 147 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 ZNF554Q86TJ5 538 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 ZBTB34Q8NCN2 500 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 OR5R1Q8NH85 324 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 JPT1Q9UK76 154 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 M0QZK8 103 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 UBE2V2Q15819 145 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 C4orf46Q504U0 113 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 TGIF2LYQ8IUE0 185 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 Q8N402 240 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 LHX4Q969G2 390 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 ZNF224Q9NZL3 707 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 ODAMA1E959 279 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 MEIOCA2RUB1 952 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 FABP7O15540 132 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 NOS1APO75052 506 aaPredicted RBP7.74□□□□□ -1.17
UPF2-202ENST00000357604 IGHV4-39P01824 125 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 GIFP27352 417 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 CEACAM6P40199 344 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 BCAP31P51572 246 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 F2RL1P55085 397 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 MADCAM1Q13477 382 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 TMEM65Q6PI78 240 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 BEST4Q8NFU0 473 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 TNFRSF14Q92956 283 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 C18orf12Q96KH6 178 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 ZNF488Q96MN9 340 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 A0A1B0GTI1 187 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 OR3A1P47881 315 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 DHODHQ02127 395 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 DHRS7BQ6IAN0 325 aaPredicted RBP7.74□□□□□ -1.17
UPF2-202ENST00000357604 UNQ9370/PRO34162Q6UXP9 181 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 CLDND2Q8NHS1 167 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 NARS2Q96I59 477 aaKnown RBP7.74□□□□□ -1.17
UPF2-202ENST00000357604 PSMG3-AS1Q96PY0 264 aa7.74□□□□□ -1.17
UPF2-202ENST00000357604 HRASLSQ9HDD0 168 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms