RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 OR5R1Q8NH85 324 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 ABHD17AQ96GS6 310 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 OR2V2Q96R30 315 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 VPS25Q9BRG1 176 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 ZDHHC11Q9H8X9 412 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 GPR27Q9NS67 375 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 GOLGA4Q13439 2230 aaKnown RBP6.44□□□□□ -1.38
VPS13A-202ENST00000357409 TGFAP01135 160 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 PSG2P11465 335 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 SULT1A2P50226 295 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 ZP4Q12836 540 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 CEBPEQ15744 281 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 NT5CQ8TCD5 201 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 PTX4Q96A99 478 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 MVB12AQ96EY5 273 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 HTR1DP28221 377 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 DEFA6Q01524 100 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 SLC38A11Q08AI6 406 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 MESTQ5EB52 335 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 C1orf185Q5T7R7 199 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 SLC23A3Q6PIS1 610 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 ITLN2Q8WWU7 325 aaPredicted RBP6.44□□□□□ -1.38
VPS13A-202ENST00000357409 MEGF10Q96KG7 1140 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 LINC00615Q96LM1 132 aaPredicted RBP6.44□□□□□ -1.38
VPS13A-202ENST00000357409 IP6K3Q96PC2 410 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 DOK1Q99704 481 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 C19orf43Q9BQ61 176 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 NKX6-2Q9C056 277 aaPredicted RBP6.44□□□□□ -1.38
VPS13A-202ENST00000357409 GABARAPL1Q9H0R8 117 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF665Q9H7R5 613 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 RNF7Q9UBF6 113 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 OR2A25A4D2G3 310 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 PEX11BO96011 259 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 FUT3P21217 361 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 SRD5A2P31213 254 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 OR2M3Q8NG83 312 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 CCL19Q99731 98 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 SIGLEC7Q9Y286 467 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 TRDV1A0A1B0GX56 115 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 C20orf202A1L168 122 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 DFFBO76075 338 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF628Q5EBL2 1059 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 FAM74A4Q5TZK3 123 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 PSMB11A5LHX3 300 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 CIDEAO60543 219 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 COX5AP20674 150 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 SNAI3Q3KNW1 292 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 NCMAPQ5T1S8 102 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 TMEM116Q8NCL8 245 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 ZPLD1Q8TCW7 415 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 C2orf50Q96LR7 162 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 MESP1Q9BRJ9 268 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 KCNIP2Q9NS61 270 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 MYO10Q9HD67 2058 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 PAGE4O60829 102 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 B2MP61769 119 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 OR10G4Q8NGN3 311 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 OR10G9Q8NGN4 311 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 OR10G7Q8NGN6 311 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 MYH11P35749 1972 aa6.44□□□□□ -1.38
VPS13A-202ENST00000357409 UBE2L6O14933 153 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF324O75467 553 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-202ENST00000357409 PMELP40967 661 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 RRN3P1Q2M238 152 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 LGALSLQ3ZCW2 172 aaPredicted RBP6.43□□□□□ -1.38
VPS13A-202ENST00000357409 DHRS4L2Q6PKH6 230 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 TEX261Q6UWH6 196 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 ZNF66Q6ZN08 573 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 GDPGP1Q6ZNW5 385 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 OR2L13Q8N349 312 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 R3HDM4Q96D70 268 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 TMPRSS5Q9H3S3 457 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 PARD6AQ9NPB6 346 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 NDUFB11Q9NX14 153 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 DNAJB12Q9NXW2 375 aaKnown RBP6.43□□□□□ -1.38
VPS13A-202ENST00000357409 NAT8BQ9UHF3 227 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 FUCA1P04066 466 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 MMP9P14780 707 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 GAPTQ8N292 157 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 Q8WTZ3 238 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 EDARADDQ8WWZ3 215 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 FRRS1LQ9P0K9 344 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 LTN1O94822 1766 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 HIST1H3AP68431 136 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 SPANXN1Q5VSR9 72 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 C16orf82Q7Z2V1 217 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 MON2Q7Z3U7 1717 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 C1QL2Q7Z5L3 287 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 LDLRAD3Q86YD5 345 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 MRPL37Q9BZE1 423 aaKnown RBP6.43□□□□□ -1.38
VPS13A-202ENST00000357409 C11orf68Q9H3H3 251 aaKnown RBP6.43□□□□□ -1.38
VPS13A-202ENST00000357409 SCTP09683 121 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 VDAC1P21796 283 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 TMPRSS3P57727 454 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 OR2D3Q8NGH3 330 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 TCRBV5S2A0A599 114 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 WNT9BO14905 357 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 CD33P20138 364 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 NUBP1P53384 320 aa6.43□□□□□ -1.38
VPS13A-202ENST00000357409 TWIST1Q15672 202 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms