RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SSPNQ14714 243 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 KHDC3LQ587J8 217 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 ACER2Q5QJU3 275 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 RAB24Q969Q5 203 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 RGPD8O14715 1765 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-201ENST00000355497 F2RL2O00254 374 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 C10orf113Q5VZT2 155 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 CTDSPLO15194 276 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 GALNSP34059 522 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 ABLIM2Q6H8Q1 611 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 RPS4Y2Q8TD47 263 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 PPM1DO15297 605 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 IGFBP6P24592 240 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-201ENST00000355497 FAM74A3Q4VXF1 159 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 GUSBP11Q6P575 273 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 CLEC18BQ6UXF7 455 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 C17orf47Q8NEP4 570 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 OR8B12Q8NGG6 310 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 ADAP1O75689 374 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 ZNF25P17030 456 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-201ENST00000355497 SRD5A2P31213 254 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 WNT3P56703 355 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 MRPL54Q6P161 138 aaKnown RBP13.16□□□□□ -0.3
LMX1B-201ENST00000355497 BHLHA15Q7RTS1 189 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-201ENST00000355497 OR8A1Q8NGG7 326 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 MOGAT1Q96PD6 335 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 TMEM140Q9NV12 185 aa13.16□□□□□ -0.3
LMX1B-201ENST00000355497 CHST1O43916 411 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 TMIGD3P0DMS9 266 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-201ENST00000355497 OR2D3Q8NGH3 330 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 AKIRIN1Q9H9L7 192 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-201ENST00000355497 HAND1O96004 215 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 CLDN18P56856 261 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 SNX22Q96L94 193 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 ASCL3Q9NQ33 180 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 TMEM30AQ9NV96 361 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 ISLRO14498 428 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 MT-CO3P00414 261 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 HOXA4Q00056 320 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-201ENST00000355497 BVESQ8NE79 360 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 OR4C12Q96R67 309 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 SIRT7Q9NRC8 400 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 ANXA10Q9UJ72 324 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 FUT9Q9Y231 359 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 MYH9P35579 1960 aaKnown RBP13.15□□□□□ -0.3
LMX1B-201ENST00000355497 C5P01031 1676 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 MPZL1O95297 269 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 HTN1P15515 57 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 STARD4Q96DR4 205 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 WDR13Q9H1Z4 485 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 PRR13Q9NZ81 148 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 A0A1W2PRD5 423 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 A0A1W2PRF3 423 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 A0A1W2PRM7 423 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 TMEM218A2RU14 115 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 GCGP01275 180 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 CD99P14209 185 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 PMELP40967 661 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 KIR2DL1P43626 348 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-201ENST00000355497 KIR2DL2P43627 348 aaPredicted RBP13.15□□□□□ -0.3
LMX1B-201ENST00000355497 RPS4XP62701 263 aaKnown RBP13.15□□□□□ -0.3
LMX1B-201ENST00000355497 SKP2Q13309 424 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 STPG2Q8N412 459 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 CADM4Q8NFZ8 388 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 OR2J1Q9GZK6 312 aa13.15□□□□□ -0.3
LMX1B-201ENST00000355497 NRXN3Q9Y4C0 1643 aa13.15□□□□□ -0.31
LMX1B-201ENST00000355497 ACAA1P09110 424 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-201ENST00000355497 FAM157CP0CG43 387 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 OR2I1PQ8NGU4 316 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 Q8WTZ3 238 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 MRGPRX3Q96LB0 322 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 KCNE1BA0A087WTH5 132 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-201ENST00000355497 IFITM10A6NMD0 228 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 KLF7O75840 302 aaPredicted RBP13.14□□□□□ -0.31
LMX1B-201ENST00000355497 HIST1H1EP10412 219 aaKnown RBP13.14□□□□□ -0.31
LMX1B-201ENST00000355497 FOXO1Q12778 655 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 COL19A1Q14993 1142 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 MPV17LQ2QL34 196 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 ZNF841Q6ZN19 808 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 ZNF383Q8NA42 475 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 OR6X1Q8NH79 312 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 ISOC2Q96AB3 205 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 VSIG4Q9Y279 399 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 CD3EP07766 207 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 PGA4P0DJD7 388 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 PGA5P0DJD9 388 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 CTLA4P16410 223 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 TSPO2Q5TGU0 170 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 OR1N2Q8NGR9 330 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 SSMEM1Q8WWF3 244 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 PCOLCE2Q9UKZ9 415 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 IGHV5-51A0A0C4DH38 117 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 SSC5DA1L4H1 1573 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 TMPRSS2O15393 492 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 SMIM6P0DI80 62 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 OR4X1Q8NH49 305 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 GLRX2Q9NS18 164 aa13.14□□□□□ -0.31
LMX1B-201ENST00000355497 ANKRD36CQ5JPF3 1778 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms