RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CACNA1DQ01668 2161 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 LAMA5O15230 3695 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 A0A1B0GTI1 187 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 H3BQ15 152 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 PNPP00491 289 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 CST2P09228 141 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 UCNP55089 124 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 DLK1P80370 383 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 POU3F1Q03052 451 aaPredicted RBP8.77□□□□□ -1
SYNE1-203ENST00000354674 P2RY6Q15077 328 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 UEVLDQ8IX04 471 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 ST6GALNAC3Q8NDV1 305 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 FAM213BQ8TBF2 198 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 TMEM37Q8WXS4 190 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 PPP1R14AQ96A00 147 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 FAM122AQ96E09 287 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 SMIM8Q96KF7 97 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 TSSK2Q96PF2 358 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 SF3B5Q9BWJ5 86 aaKnown RBP8.77□□□□□ -1
SYNE1-203ENST00000354674 SLC2A8Q9NY64 477 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 GAB2Q9UQC2 676 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 PAM16Q9Y3D7 125 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 DMXL2Q8TDJ6 3036 aa8.77□□□□□ -1
SYNE1-203ENST00000354674 ZNF320A2RRD8 509 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 NPIPA5E9PKD4 350 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 EIF1AYO14602 144 aaKnown RBP8.77□□□□□ -1.01
SYNE1-203ENST00000354674 XKRYO14609 159 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 CTAG2O75638 210 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 RENP00797 406 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 ITGB2P05107 769 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 RPS2P15880 293 aaKnown RBP8.77□□□□□ -1.01
SYNE1-203ENST00000354674 MMP16P51512 607 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 CCL20P78556 96 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 SLC17A1Q14916 467 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 TBR1Q16650 682 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 ABLIM2Q6H8Q1 611 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 RPUSD3Q6P087 351 aaKnown RBP8.77□□□□□ -1.01
SYNE1-203ENST00000354674 OR10D3Q8NH80 312 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 TERB2Q8NHR7 220 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 MARCH1Q8TCQ1 289 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 SDSLQ96GA7 329 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 UPB1Q9UBR1 384 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 NPIPA1Q9UND3 350 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 LIPGQ9Y5X9 500 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 FREM3P0C091 2139 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 A0A0A6YYH2 397 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 A6NJ64 397 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 CD37P11049 281 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 NPY4RP50391 375 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 TMPRSS3P57727 454 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 HIST3H3Q16695 136 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 MOGAT2Q3SYC2 334 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 DMRTC1Q5HYR2 192 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 TMEM225Q6GV28 225 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 DRAM2Q6UX65 266 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF100Q8IYN0 542 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 RBMXL3Q8N7X1 1067 aaKnown RBP8.77□□□□□ -1.01
SYNE1-203ENST00000354674 SEH1LQ96EE3 360 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 ADAD1Q96M93 576 aaKnown RBP8.77□□□□□ -1.01
SYNE1-203ENST00000354674 UCN2Q96RP3 112 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 INPP5EQ9NRR6 644 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 CGGBP1Q9UFW8 167 aaPredicted RBP8.77□□□□□ -1.01
SYNE1-203ENST00000354674 IKZF2Q9UKS7 526 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 LSM5Q9Y4Y9 91 aaKnown RBP8.77□□□□□ -1.01
SYNE1-203ENST00000354674 GTF3C1Q12789 2109 aa8.77□□□□□ -1.01
SYNE1-203ENST00000354674 IGLV1-36A0A0B4J1U3 117 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 C20orf202A1L168 122 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 OR4C45A6NMZ5 311 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 H7C1C5 153 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 K7EM74 188 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 CCL25O15444 150 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 TMEM127O75204 238 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 CRTAPO75718 401 aaPredicted RBP8.76□□□□□ -1.01
SYNE1-203ENST00000354674 FUT3P21217 361 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 ALDH3B1P43353 468 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 LCN6P62502 163 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 VAMP2P63027 116 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 BDH1Q02338 343 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 SLC35E3Q7Z769 313 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 ZIC4Q8N9L1 334 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 PNLDC1Q8NA58 520 aaKnown RBP8.76□□□□□ -1.01
SYNE1-203ENST00000354674 OR9K2Q8NGE7 335 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 TMEM106AQ96A25 262 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 FAM210BQ96KR6 192 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 ABHD14AQ9BUJ0 271 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 ALG12Q9BV10 488 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 PLSCR2Q9NRY7 297 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 GPR173Q9NS66 373 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 MED29Q9NX70 200 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 B9D1Q9UPM9 204 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 RAXQ9Y2V3 346 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 ZNF716A6NP11 495 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 PRR32B1ATL7 298 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 F8VVB4 439 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 F8VWA3 439 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 WNT11O96014 354 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 TBPP20226 339 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 HTR2CP28335 458 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 SNCAP37840 140 aa8.76□□□□□ -1.01
SYNE1-203ENST00000354674 PMP22Q01453 160 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms