RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 UBCP0CG48 685 aaKnown RBP12.66□□□□□ -0.38
PDGFA-201ENST00000354513 DBTP11182 482 aaKnown RBP12.66□□□□□ -0.38
PDGFA-201ENST00000354513 PRKACAP17612 351 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 ATF1P18846 271 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 AZGP1P25311 298 aaKnown RBP12.66□□□□□ -0.38
PDGFA-201ENST00000354513 ERP29P30040 261 aaKnown RBP12.66□□□□□ -0.38
PDGFA-201ENST00000354513 POU3F4P49335 361 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 RBP2P50120 134 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 C6orf141Q5SZD1 244 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 Q8IYB0 196 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 CCDC54Q8NEL0 328 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 BPIFB6Q8NFQ5 453 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 OR5AU1Q8NGC0 362 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 PP6455Q8WZ26 134 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 C10orf35Q96D05 121 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 ZNF286AQ9HBT8 521 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 HMG20AQ9NP66 347 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 UBE2J1Q9Y385 318 aaPredicted RBP12.66□□□□□ -0.38
PDGFA-201ENST00000354513 LRRC42Q9Y546 428 aa12.66□□□□□ -0.38
PDGFA-201ENST00000354513 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
PDGFA-201ENST00000354513 J3QRE1 110 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 ALX3O95076 343 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 OR2H2O95918 312 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 HTR1DP28221 377 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 CD34P28906 385 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 ATP1B3P54709 279 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 MED21Q13503 144 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 SPIN3Q5JUX0 258 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 UTS2BQ765I0 119 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 OR51A4Q8NGJ6 313 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 OR2G2Q8NGZ5 317 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 SGCDQ92629 289 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 CORO2AQ92828 525 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 LGALS12Q96DT0 336 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 COQ2Q96H96 371 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 COMMD4Q9H0A8 199 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 FRRS1LQ9P0K9 344 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 GNG8Q9UK08 70 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 HHLA2Q9UM44 414 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 PCDHGB5Q9Y5G0 923 aa12.65□□□□□ -0.38
PDGFA-201ENST00000354513 K7EIL1 84 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 GLIPR1P48060 266 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 BDH1Q02338 343 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 PDZK1IP1Q13113 114 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 KLHL22Q53GT1 634 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 ARSJQ5FYB0 599 aaPredicted RBP12.64□□□□□ -0.39
PDGFA-201ENST00000354513 Q6P435 159 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 FDX2Q6P4F2 183 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 HEPN1Q6WQI6 88 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 C16orf82Q7Z2V1 217 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 ABHD12Q8N2K0 398 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 FGGYQ96C11 551 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 SPACA5Q96QH8 159 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 LIN7BQ9HAP6 207 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 PLCXD1Q9NUJ7 323 aa12.64□□□□□ -0.39
PDGFA-201ENST00000354513 EXOGQ9Y2C4 368 aaKnown RBP12.64□□□□□ -0.39
PDGFA-201ENST00000354513 IRGMA1A4Y4 181 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 EFCAB10A6NFE3 127 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 LY6LH3BQJ8 138 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 PEX14O75381 377 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 KDM4BO94953 1096 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 FADS2O95864 444 aaKnown RBP12.63□□□□□ -0.39
PDGFA-201ENST00000354513 ISG15P05161 165 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 CDK2P24941 298 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 LMO1P25800 156 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 MTCP1P56278 107 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 KRTAP10-11P60412 298 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 AESQ08117 197 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 RAB40BQ12829 278 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 C17orf58Q2M2W7 97 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 LHFPL2Q6ZUX7 228 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 TRAPPC6BQ86SZ2 158 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 OR52I1Q8NGK6 324 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 GGHQ92820 318 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 MYDGFQ969H8 173 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 OPALINQ96PE5 141 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 PPIL3Q9H2H8 161 aaKnown RBP12.63□□□□□ -0.39
PDGFA-201ENST00000354513 EXOSC4Q9NPD3 245 aaKnown RBP12.63□□□□□ -0.39
PDGFA-201ENST00000354513 MRPS18AQ9NVS2 196 aaKnown RBP12.63□□□□□ -0.39
PDGFA-201ENST00000354513 SCN3BQ9NY72 215 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 DPM3Q9P2X0 92 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 GSTK1Q9Y2Q3 226 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 RYR3Q15413 4870 aa12.63□□□□□ -0.39
PDGFA-201ENST00000354513 OR2F2O95006 317 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 SERPINA3P01011 423 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 ALDOBP05062 364 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 LPLP06858 475 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 CD33P20138 364 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 HLA-DRB5Q30154 266 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 ABCA11PQ4W5N1 156 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 TMEM244Q5VVB8 128 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 FAM220AQ7Z4H9 259 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 RTN4RL2Q86UN3 420 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 OR5D18Q8NGL1 313 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 SPSB1Q96BD6 273 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 RBM14Q96PK6 669 aaKnown RBP12.62□□□□□ -0.39
PDGFA-201ENST00000354513 TAS2R3Q9NYW6 316 aa12.62□□□□□ -0.39
PDGFA-201ENST00000354513 CNOT2Q9NZN8 540 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms