RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 A0A1W2PRD5 423 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 A0A1W2PRF3 423 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 A0A1W2PRM7 423 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 DISC1C4P0D8 188 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 GNGT2O14610 69 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 OR2A4O95047 310 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 THY1P04216 161 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 LIPFP07098 398 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 FUT1P19526 365 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 DDTP30046 118 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 S100A11P31949 105 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 GGT2P36268 569 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 ATP6V1E1P36543 226 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 ZNF133P52736 654 aaPredicted RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 DEFA5Q01523 94 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 P2RY14Q15391 338 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 MEDAGQ5VYS4 303 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 SLC25A47Q6Q0C1 308 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 ZNF841Q6ZN19 808 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 C1orf122Q6ZSJ8 110 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 RBM45Q8IUH3 476 aaKnown RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 C10orf111Q8N326 155 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 OR8G5Q8NG78 346 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 OR4S1Q8NGB4 309 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 OR6T1Q8NGN1 323 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 OR11L1Q8NGX0 322 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 OR13G1Q8NGZ3 307 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 PFN4Q8NHR9 129 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 DTD1Q8TEA8 209 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 ACOT12Q8WYK0 555 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 RRNAD1Q96FB5 475 aaKnown RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 ZNF582Q96NG8 517 aaPredicted RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 OR2A7Q96R45 310 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 TSNAXQ99598 290 aaKnown RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 TOLLIPQ9H0E2 274 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 ABCB9Q9NP78 766 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 NDUFB11Q9NX14 153 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 ZNF222Q9UK12 451 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 A0A1W2PN81 502 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 A0A1W2PQL4 384 aaPredicted RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 ANXA2P2A6NMY6 339 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 TRDCB7Z8K6 153 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 TSTD3H0UI37 97 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 AP4M1O00189 453 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 LGALS8O00214 317 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 LYPD3O95274 346 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 MSR1P21757 451 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 TUBG1P23258 451 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 NFYAP23511 347 aaPredicted RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 MAS1LP35410 378 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 CHRNA7P36544 502 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 NPY4RP50391 375 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 RPS7P62081 194 aaKnown RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 RPP30P78346 268 aaKnown RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 HOXA4Q00056 320 aaPredicted RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 POU4F2Q12837 409 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 DYRK1AQ13627 763 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 ENDOGQ14249 297 aaKnown RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 DEFB121Q5J5C9 76 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 SFRP4Q6FHJ7 346 aaPredicted RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 MZT2AQ6P582 158 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 VMO1Q7Z5L0 202 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 NAA40Q86UY6 237 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 CYP4Z1Q86W10 505 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 PUSL1Q8N0Z8 303 aaKnown RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 KLHDC1Q8N7A1 406 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 OR9Q1Q8NGQ5 310 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 OR4K15Q8NH41 348 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 RXFP4Q8TDU9 374 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 NOL4LQ96MY1 436 aaPredicted RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 SEC11CQ9BY50 192 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 SIRPDQ9H106 197 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 GAL3ST2Q9H3Q3 398 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 TUBG2Q9NRH3 451 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 DCAF13Q9NV06 445 aaKnown RBP9.22□□□□□ -0.93
RTN3-204ENST00000354497 RASL12Q9NYN1 266 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 CTSZQ9UBR2 303 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 DNAJB11Q9UBS4 358 aa9.22□□□□□ -0.93
RTN3-204ENST00000354497 COLCA2A8K830 154 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 MLNRO43193 412 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 ADAM20O43506 726 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 MED6O75586 246 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 MT-ND4LP03901 98 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 HLA-DPB1P04440 258 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 UBBP0CG47 229 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 UBCP0CG48 685 aaKnown RBP9.21□□□□□ -0.94
RTN3-204ENST00000354497 VSIG10L2P0DP72 767 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 GABRB1P18505 474 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 CCR9P51686 369 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 RPS27AP62979 156 aaKnown RBP9.21□□□□□ -0.94
RTN3-204ENST00000354497 PRB3Q04118 309 aaPredicted RBP9.21□□□□□ -0.94
RTN3-204ENST00000354497 GPR176Q14439 515 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 PEA15Q15121 130 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 OR8B8Q15620 311 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 SSX1Q16384 188 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 C9orf152Q5JTZ5 239 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 PRAMEF6Q5VXH4 476 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 ZNF730Q6ZMV8 503 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 DNAAF1Q8NEP3 725 aa9.21□□□□□ -0.94
RTN3-204ENST00000354497 OR56B4Q8NH76 319 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms