RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SF3B5Q9BWJ5 86 aaKnown RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 TM2D1Q9BX74 207 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 ELL3Q9HB65 397 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 RPS10P5Q9NQ39 176 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 POMT1Q9Y6A1 747 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 ITPR1Q14643 2758 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 TRGV5A0A0B4J1U4 118 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 CRYM-AS1A6NIL9 109 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 DNPH1O43598 174 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 DHRS3O75911 302 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF205O95201 554 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 SCGB1D2O95969 90 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 PATE4P0C8F1 98 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 CSNK1A1P48729 337 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 FHITP49789 147 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF133P52736 654 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 ENDOGQ14249 297 aaKnown RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 MIDNQ504T8 468 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 LRRC18Q8N456 261 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 NANPQ8TBE9 248 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 CPNE4Q96A23 557 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 ISOC2Q96AB3 205 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 FBXO17Q96EF6 278 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 SCRT1Q9BWW7 348 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 RBM24Q9BX46 236 aaKnown RBP7.42□□□□□ -1.22
TRIM55-204ENST00000353317 CRLF2Q9HC73 371 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 DECR2Q9NUI1 292 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 PLEKHJ1Q9NW61 149 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 KPTNQ9Y664 436 aa7.42□□□□□ -1.22
TRIM55-204ENST00000353317 A0A1W2PPE3 182 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 DHHO43323 396 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 CTSDP07339 412 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-204ENST00000353317 CTSSP25774 331 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 SNCAP37840 140 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 SMCO1Q147U7 214 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 EIF2S3LQ2VIR3 472 aaKnown RBP7.41□□□□□ -1.22
TRIM55-204ENST00000353317 SP6Q3SY56 376 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 AWAT1Q58HT5 328 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 C10orf128Q5T292 105 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 TSPO2Q5TGU0 170 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 RPUSD3Q6P087 351 aaKnown RBP7.41□□□□□ -1.22
TRIM55-204ENST00000353317 IGFL3Q6UXB1 125 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 AAED1Q7RTV5 226 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 SLC16A13Q7RTY0 426 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 S100A13Q99584 98 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 CHST5Q9GZS9 411 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF581Q9P0T4 197 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 EDARQ9UNE0 448 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 PIGLQ9Y2B2 252 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 V9GYS6 101 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 NBASA2RRP1 2371 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 TRAV17A0A0B4J275 112 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 C1orf196B1AJZ1 125 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 RRP8O43159 456 aaKnown RBP7.41□□□□□ -1.22
TRIM55-204ENST00000353317 TSPAN15O95858 294 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 IFNA21P01568 189 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 IGHG3P01860 377 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 MBPP02686 304 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-204ENST00000353317 SNRNP70P08621 437 aaKnown RBP7.41□□□□□ -1.22
TRIM55-204ENST00000353317 DAOP14920 347 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 PIGPP57054 158 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 NUFIP2Q7Z417 695 aaKnown RBP7.41□□□□□ -1.22
TRIM55-204ENST00000353317 EXTL1Q92935 676 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 ABHD17AQ96GS6 310 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 C20orf24Q9BUV8 137 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 CALHM2Q9HA72 323 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 FAM212BQ9NTI7 297 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-204ENST00000353317 ANXA10Q9UJ72 324 aa7.41□□□□□ -1.22
TRIM55-204ENST00000353317 IGKV3D-15A0A087WSY6 115 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 A0A0U1RQV5 110 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 C7orf77A4D0Y5 90 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 UBE2CO00762 179 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 C1QL1O75973 258 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 DBHP09172 617 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 DANCRP0C864 163 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 OR5H8P0DN80 308 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 TMEM225BP0DP42 221 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 AGAP20933 346 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 ECI1P42126 302 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF616Q08AN1 781 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 GUK1Q16774 197 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 RNF212Q495C1 297 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 C9orf135Q5VTT2 229 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 FOXL2NBQ6ZUU3 175 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 PP6455Q8WZ26 134 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 Q96M66 194 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 FAAP24Q9BTP7 215 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 ARV1Q9H2C2 271 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 WFDC1Q9HC57 220 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 SLC7A10Q9NS82 523 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 RAXQ9Y2V3 346 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 SPTA1P02549 2419 aa7.4□□□□□ -1.22
TRIM55-204ENST00000353317 ZNF503-AS2A6NEH8 195 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 A6NLC8 198 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 XRCC2O43543 280 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 ANGPTL7O43827 346 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 CA11O75493 328 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 DIRAS3O95661 229 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 MT-ND4LP03901 98 aa7.4□□□□□ -1.23
TRIM55-204ENST00000353317 S100A6P06703 90 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms