RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 XKRY2A2RUG3 117 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 PFN1P07737 140 aaKnown RBP12.98□□□□□ -0.33
TRAF3-202ENST00000351691 TMEM225BP0DP42 221 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 ZNF121P58317 390 aaPredicted RBP12.98□□□□□ -0.33
TRAF3-202ENST00000351691 PAX5Q02548 391 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 CENPVQ7Z7K6 275 aaPredicted RBP12.98□□□□□ -0.33
TRAF3-202ENST00000351691 D2HGDHQ8N465 521 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 TMEM252Q8N6L7 170 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 ZNF441Q8N8Z8 693 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 TMEM171Q8WVE6 324 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 TMEM170AQ8WVE7 144 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.98□□□□□ -0.33
TRAF3-202ENST00000351691 SLC2A9Q9NRM0 540 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 MYOTQ9UBF9 498 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 LHFPL6Q9Y693 200 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 USP34Q70CQ2 3546 aa12.98□□□□□ -0.33
TRAF3-202ENST00000351691 TAS2R30P59541 319 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 PRDX4Q13162 271 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 THEM4Q5T1C6 240 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 C1QL2Q7Z5L3 287 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 KMT5CQ86Y97 462 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 PLXDC1Q8IUK5 500 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 OR2AJ1Q8NGZ0 328 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 FAM71F1Q96KD3 344 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-202ENST00000351691 AGMATQ9BSE5 352 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 PLEKHJ1Q9NW61 149 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 SLC7A11Q9UPY5 501 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 TRDCB7Z8K6 153 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 IGLV3-1P01715 115 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 BCL2P10415 239 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 SRFP11831 508 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 NKX2-1P43699 371 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-202ENST00000351691 NXPH1P58417 271 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 RAB11AP62491 216 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 DEFB133Q30KQ1 61 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 WDFY1Q8IWB7 410 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 FAM185AQ8N0U4 392 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 OR1L3Q8NH93 324 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 Q96M66 194 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 CDX2Q99626 313 aaPredicted RBP12.97□□□□□ -0.33
TRAF3-202ENST00000351691 TPSD1Q9BZJ3 242 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 CHST11Q9NPF2 352 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 RFNGQ9Y644 331 aa12.97□□□□□ -0.33
TRAF3-202ENST00000351691 PMS2P11Q13670 270 aa12.96□□□□□ -0.33
TRAF3-202ENST00000351691 C1orf189Q5VU69 101 aa12.96□□□□□ -0.33
TRAF3-202ENST00000351691 OR10J5Q8NHC4 309 aa12.96□□□□□ -0.33
TRAF3-202ENST00000351691 MBD3L1Q8WWY6 194 aa12.96□□□□□ -0.33
TRAF3-202ENST00000351691 TMEM234Q8WY98 164 aa12.96□□□□□ -0.33
TRAF3-202ENST00000351691 TOMM40LQ969M1 308 aa12.96□□□□□ -0.33
TRAF3-202ENST00000351691 MOB3AQ96BX8 217 aa12.96□□□□□ -0.33
TRAF3-202ENST00000351691 REEP6Q96HR9 211 aa12.96□□□□□ -0.33
TRAF3-202ENST00000351691 TMEM208Q9BTX3 173 aa12.96□□□□□ -0.33
TRAF3-202ENST00000351691 IGHV1OR21-1A0A087WYE8 117 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 DUXBA0A1W2PPF3 345 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 PROB1E7EW31 1015 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 MSTNO14793 375 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 TOX3O15405 576 aaPredicted RBP12.96□□□□□ -0.34
TRAF3-202ENST00000351691 RPLP1P05386 114 aaKnown RBP12.96□□□□□ -0.34
TRAF3-202ENST00000351691 PGA3P0DJD8 388 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 NR2C1P13056 603 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 CTSSP25774 331 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 FAM3BP58499 235 aaPredicted RBP12.96□□□□□ -0.34
TRAF3-202ENST00000351691 GRB2P62993 217 aaKnown RBP12.96□□□□□ -0.34
TRAF3-202ENST00000351691 IL24Q13007 206 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 NSDHLQ15738 373 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 CYB5R2Q6BCY4 276 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 Q6ZSR3 168 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 C6orf201Q7Z4U5 140 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 ZNF573Q86YE8 665 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 ZNF100Q8IYN0 542 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 OR5C1Q8NGR4 320 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 PP6455Q8WZ26 134 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 PHF7Q9BWX1 381 aaPredicted RBP12.96□□□□□ -0.34
TRAF3-202ENST00000351691 MRPL13Q9BYD1 178 aaKnown RBP12.96□□□□□ -0.34
TRAF3-202ENST00000351691 LRFN1Q9P244 771 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 ZNF319Q9P2F9 582 aa12.96□□□□□ -0.34
TRAF3-202ENST00000351691 A0A1W2PNV4 684 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 CLEC18AA5D8T8 446 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 ZNF850A8MQ14 1090 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 STMND1H3BQB6 276 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 DUX1O43812 170 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 FGF5P12034 268 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 IL11P20809 199 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 ASCL1P50553 236 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 DYNLT3P51808 116 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 VAMP2P63027 116 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 POU3F1Q03052 451 aaPredicted RBP12.95□□□□□ -0.34
TRAF3-202ENST00000351691 KCNMB1Q16558 191 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 ACOT6Q3I5F7 207 aaPredicted RBP12.95□□□□□ -0.34
TRAF3-202ENST00000351691 BTNL3Q6UXE8 466 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 CLEC18CQ8NCF0 446 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 C10orf35Q96D05 121 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 ZNF845Q96IR2 970 aaPredicted RBP12.95□□□□□ -0.34
TRAF3-202ENST00000351691 ATP5SQ99766 215 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 GLRX2Q9NS18 164 aa12.95□□□□□ -0.34
TRAF3-202ENST00000351691 A0A1B0GX78 115 aa12.94□□□□□ -0.34
TRAF3-202ENST00000351691 OR4A8P0C604 315 aa12.94□□□□□ -0.34
TRAF3-202ENST00000351691 PCP4P48539 62 aa12.94□□□□□ -0.34
TRAF3-202ENST00000351691 GABREP78334 506 aa12.94□□□□□ -0.34
TRAF3-202ENST00000351691 HERPUD1Q15011 391 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms