RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SPACA1Q9HBV2 294 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 Q9N2K0 584 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 NECAP2Q9NVZ3 263 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 LUZP4Q9P127 313 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 IL36RNQ9UBH0 155 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 SLC23A1Q9UHI7 598 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 PURGQ9UJV8 347 aaKnown RBP5.89□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF835Q9Y2P0 537 aa5.89□□□□□ -1.47
TRIM55-203ENST00000350034 POLQO75417 2590 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 AKAP13Q12802 2813 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 TRAV24A0A0B4J272 114 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 A8MXE2 369 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 RHBDL1O75783 438 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 MPC2O95563 127 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 PGA5P0DJD9 388 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 AKR1C4P17516 323 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 PRKACAP17612 351 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 GLRA1P23415 457 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 NFYAP23511 347 aaPredicted RBP5.88□□□□□ -1.47
TRIM55-203ENST00000350034 VAMP1P23763 118 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 ARPC4P59998 168 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 SEC61A1P61619 476 aaKnown RBP5.88□□□□□ -1.47
TRIM55-203ENST00000350034 NAAAQ02083 359 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF154Q13106 437 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 IL15RAQ13261 267 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 OPCMLQ14982 345 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 IGFBP7Q16270 282 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 ANKRD55Q3KP44 614 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 SLC22A25Q6T423 547 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 CLEC18BQ6UXF7 455 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 Q6ZR03 302 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 DOLPP1Q86YN1 238 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 C11orf53Q8IXP5 236 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 Q8IYB0 196 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 GAPTQ8N292 157 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 SCCPDHQ8NBX0 429 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 MARVELD3Q96A59 401 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 MOB3AQ96BX8 217 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 PIK3IP1Q96FE7 263 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF488Q96MN9 340 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 FAM210AQ96ND0 272 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 FXYD6Q9H0Q3 95 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 PIGMQ9H3S5 423 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 RIMS4Q9H426 269 aaPredicted RBP5.88□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF442Q9H7R0 627 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 HES4Q9HCC6 221 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 RAB18Q9NP72 206 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 TMEM100Q9NV29 134 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 POLDIP2Q9Y2S7 368 aa5.88□□□□□ -1.47
TRIM55-203ENST00000350034 CELSR3Q9NYQ7 3312 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 DOCK7Q96N67 2140 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 NOTCH2Q04721 2471 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 NF1P21359 2839 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 TRBV6-7A0A0A0MS04 114 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 FAM221AA4D161 298 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 CRYM-AS1A6NIL9 109 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 H0YL77 283 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 MLNRO43193 412 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 TUSC2O75896 110 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 PTBP3O95758 552 aaKnown RBP5.87□□□□□ -1.47
TRIM55-203ENST00000350034 PGAM2P15259 253 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 RPA2P15927 270 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 PI3P19957 117 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 C4BPBP20851 252 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 KCNJ3P48549 501 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF81P51508 661 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 GMFBP60983 142 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 NKX6-1P78426 367 aaPredicted RBP5.87□□□□□ -1.47
TRIM55-203ENST00000350034 SORDQ00796 357 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 FGL1Q08830 312 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 BAMBIQ13145 260 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF146Q15072 292 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 OR8G1Q15617 311 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 MSMPQ1L6U9 139 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF718Q3SXZ3 478 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 LIN54Q6MZP7 749 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 C11orf88Q6PI97 169 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 TEX261Q6UWH6 196 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 SLC7A5P1Q8MH63 180 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 BATF2Q8N1L9 274 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 CISD2Q8N5K1 135 aaKnown RBP5.87□□□□□ -1.47
TRIM55-203ENST00000350034 SPERTQ8NA61 448 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 SUMF2Q8NBJ7 301 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 POC1AQ8NBT0 407 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 ZNF680Q8NEM1 530 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 LILRB4Q8NHJ6 448 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 COQ8AQ8NI60 647 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 MRPL30Q8TCC3 161 aaKnown RBP5.87□□□□□ -1.47
TRIM55-203ENST00000350034 CASTOR1Q8WTX7 329 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 S100PBPQ96BU1 408 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 ELMOD3Q96FG2 381 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 GALNT14Q96FL9 552 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 ADAT1Q9BUB4 502 aaKnown RBP5.87□□□□□ -1.47
TRIM55-203ENST00000350034 WDR13Q9H1Z4 485 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 CXXC4Q9H2H0 198 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 CLEC4MQ9H2X3 399 aaPredicted RBP5.87□□□□□ -1.47
TRIM55-203ENST00000350034 TREM2Q9NZC2 230 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 C14orf166Q9Y224 244 aaKnown RBP5.87□□□□□ -1.47
TRIM55-203ENST00000350034 U3KQ87 197 aa5.87□□□□□ -1.47
TRIM55-203ENST00000350034 MYO7BQ6PIF6 2116 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms