RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 BIDP55957 195 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 COL10A1Q03692 680 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 MFAP5Q13361 173 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 FAM57BQ71RH2 274 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 OR1P1Q8NH06 330 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 CALHM2Q9HA72 323 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 CDH20Q9HBT6 801 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 SLC2A9Q9NRM0 540 aa16.19■□□□□ 0.18
SCARF1-202ENST00000348987 A0A1B0GU03 582 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 C5orf63A6NC05 138 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 E9PLN8 166 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 TIAF1O95411 115 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 MBP02144 154 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 SMAD4Q13485 552 aaKnown RBP16.18■□□□□ 0.18
SCARF1-202ENST00000348987 MEX3BQ6ZN04 569 aaKnown RBP16.18■□□□□ 0.18
SCARF1-202ENST00000348987 OR5C1Q8NGR4 320 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 PHF1O43189 567 aaPredicted RBP16.18■□□□□ 0.18
SCARF1-202ENST00000348987 HSPA12AO43301 675 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 TGOLN2O43493 480 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 DUX1O43812 170 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 CYB5R3P00387 301 aaPredicted RBP16.18■□□□□ 0.18
SCARF1-202ENST00000348987 MMP7P09237 267 aaPredicted RBP16.18■□□□□ 0.18
SCARF1-202ENST00000348987 EPHA1P21709 976 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 FAM90A2PQ658T7 463 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 TMEM217Q8N7C4 229 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 SLC35G3Q8N808 338 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 LRTM2Q8N967 370 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 OR4D5Q8NGN0 318 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 TMEM234Q8WY98 164 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 FSCN3Q9NQT6 498 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 GNG13Q9P2W3 67 aa16.18■□□□□ 0.18
SCARF1-202ENST00000348987 TRBV24-1A0A075B6N3 115 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 RER1O15258 196 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 DFFBO76075 338 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 CST7O76096 145 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 OR4A8P0C604 315 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 MMP9P14780 707 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 FAM69BQ5VUD6 431 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 ABLIM2Q6H8Q1 611 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 MYO7BQ6PIF6 2116 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 LGI3Q8N145 548 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 FAAP24Q9BTP7 215 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 CBLN4Q9NTU7 201 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 B3GAT1Q9P2W7 334 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 CCDC163A0A0D9SF12 145 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 CD55P08174 381 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 CMTM1Q8IZ96 169 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 OR10A7Q8NGE5 316 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 OR2AJ1Q8NGZ0 328 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 RBMXL1Q96E39 390 aaKnown RBP16.17■□□□□ 0.18
SCARF1-202ENST00000348987 MAGT1Q9H0U3 335 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 MOB1AQ9H8S9 216 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 CHST11Q9NPF2 352 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 GLRX2Q9NS18 164 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 TMEM242Q9NWH2 141 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 ZNF581Q9P0T4 197 aa16.17■□□□□ 0.18
SCARF1-202ENST00000348987 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 ANKUB1A6NFN9 424 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 SLC33A1O00400 549 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-202ENST00000348987 PITX3O75364 302 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 FCGR2AP12318 317 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 NUBP1P53384 320 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 ZFP36L1Q07352 338 aaKnown RBP16.16■□□□□ 0.18
SCARF1-202ENST00000348987 HIST1H2AAQ96QV6 131 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 SERINC1Q9NRX5 453 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 XKRY2A2RUG3 117 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 ZFP92A6NM28 416 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 MARCH11A6NNE9 402 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 PROB1E7EW31 1015 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 FOSL2P15408 326 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 C17orf67Q0P5P2 114 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 ARL6IP1Q15041 203 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 P2RY6Q15077 328 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 GPR137CQ8N3F9 429 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 GAB2Q9UQC2 676 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 RALGAPA1Q6GYQ0 2036 aa16.16■□□□□ 0.18
SCARF1-202ENST00000348987 COL5A1P20908 1838 aaPredicted RBP16.16■□□□□ 0.18
SCARF1-202ENST00000348987 LOC102723971A0A1B0GUV8 181 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 NKX2-6A6NCS4 301 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 LIPT2A6NK58 231 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 SSSCA1O60232 199 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 GCGP01275 180 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 ALDH3B1P43353 468 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 DYNLT3P51808 116 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 ZP4Q12836 540 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 MPV17LQ2QL34 196 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 WDR25Q64LD2 544 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-202ENST00000348987 DOK3Q7L591 496 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 SLC16A14Q7RTX9 510 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 TMEM252Q8N6L7 170 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 NFAM1Q8NET5 270 aaPredicted RBP16.15■□□□□ 0.18
SCARF1-202ENST00000348987 TM2D1Q9BX74 207 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 NECAP2Q9NVZ3 263 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 ZNF814B7Z6K7 855 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 TLE4Q04727 773 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 ZNF283Q8N7M2 679 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 ST8SIA1Q92185 356 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 PIGTQ969N2 578 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 C11orf1Q9H5F2 150 aa16.15■□□□□ 0.18
SCARF1-202ENST00000348987 A0A1W2PNR3 127 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms