RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CYB5BO43169 146 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 C1QL1O75973 258 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 UMODP07911 640 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 TMEM225BP0DP42 221 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 IL11P20809 199 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 ATP6V0CP27449 155 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 HLA-DRB3P79483 266 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 BAXQ07812 192 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 GAMTQ14353 236 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 ICAM4Q14773 271 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 AKR1C8PQ5T2L2 129 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 FIP1L1Q6UN15 594 aaKnown RBP13.78□□□□□ -0.2
HMGA1-202ENST00000347617 UEVLDQ8IX04 471 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 FAM210BQ96KR6 192 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 LURAP1Q96LR2 239 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 Q96M66 194 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 RARRES2Q99969 163 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 GPR61Q9BZJ8 451 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 SPRY4Q9C004 299 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 CTDSP1Q9GZU7 261 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 EXPH5Q8NEV8 1989 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 IGLV3-32A0A0A0MS00 114 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 DUXBA0A1W2PPF3 345 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 STMND1H3BQB6 276 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 GDF9O60383 454 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 SOD3P08294 240 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 FOXL2P58012 376 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 NHLH2Q02577 135 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 TAF9Q16594 264 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 SUMF1Q8NBK3 374 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 OR10AD1Q8NGE0 317 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 MSI2Q96DH6 328 aaKnown RBP13.78□□□□□ -0.2
HMGA1-202ENST00000347617 PGAM5Q96HS1 289 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 DEFB126Q9BYW3 111 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 MCTS1Q9ULC4 181 aaKnown RBP13.78□□□□□ -0.2
HMGA1-202ENST00000347617 B3GALT1Q9Y5Z6 326 aa13.78□□□□□ -0.2
HMGA1-202ENST00000347617 TRBV24-1A0A075B6N3 115 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 CLDN34H7C241 214 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 XRCC2O43543 280 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 DHRS3O75911 302 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 DIRAS3O95661 229 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 PGA4P0DJD7 388 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 PGA3P0DJD8 388 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 MTCP1P56278 107 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 ERVFRD-1P60508 538 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 OR8B8Q15620 311 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 SLC25A53Q5H9E4 307 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 FAM57BQ71RH2 274 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 LYZL2Q7Z4W2 148 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 PNRC2Q9NPJ4 139 aaKnown RBP13.77□□□□□ -0.21
HMGA1-202ENST00000347617 PPP1R14DQ9NXH3 145 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 VDAC3Q9Y277 283 aa13.77□□□□□ -0.21
HMGA1-202ENST00000347617 IGKV1D-8A0A087WSZ0 117 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 PIGBOS1A0A0B4J2F0 54 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 ZNF850A8MQ14 1090 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 ZNF727A8MUV8 499 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 DKK1O94907 266 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 WISP1O95388 367 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 OPN1MWP04001 364 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 TRGC1P0CF51 173 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 RNF224P0DH78 156 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 OPN1MW2P0DN77 364 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 OPN1MW3P0DN78 364 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 FCGR2AP12318 317 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 FOLR3P41439 243 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 NOVA1P51513 510 aaKnown RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 LSM6P62312 80 aaKnown RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 HNF4GQ14541 408 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 JOSD1Q15040 202 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 C6orf15Q6UXA7 325 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 DPPA2Q7Z7J5 298 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 OR6X1Q8NH79 312 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 POM121Q96HA1 1249 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 MEGF10Q96KG7 1140 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 RHOVQ96L33 236 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 PACRGQ96M98 296 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 METTL9Q9H1A3 318 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 HS3ST3B1Q9Y662 390 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 RALGAPA1Q6GYQ0 2036 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 CCDC187A0A096LP49 1063 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 TGIF2-C20orf24A0A0A6YYL0 155 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 CYB5R3P00387 301 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 TRGC2P03986 189 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 COX6A1P12074 109 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 BTF3P20290 206 aaKnown RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 OR8G1Q15617 311 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 CRIP3Q6Q6R5 217 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 CLEC9AQ6UXN8 241 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 SPSB1Q96BD6 273 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 MOB3AQ96BX8 217 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 ACTR3CQ9C0K3 210 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 SLC2A9Q9NRM0 540 aa13.76□□□□□ -0.21
HMGA1-202ENST00000347617 LYRM2Q9NU23 88 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 FOXD3Q9UJU5 478 aaPredicted RBP13.76□□□□□ -0.21
HMGA1-202ENST00000347617 LOC102723971A0A1B0GUV8 181 aa13.75□□□□□ -0.21
HMGA1-202ENST00000347617 H0YL77 283 aa13.75□□□□□ -0.21
HMGA1-202ENST00000347617 TLX3O43711 291 aaPredicted RBP13.75□□□□□ -0.21
HMGA1-202ENST00000347617 FABP4P15090 132 aa13.75□□□□□ -0.21
HMGA1-202ENST00000347617 NKX2-1P43699 371 aaPredicted RBP13.75□□□□□ -0.21
HMGA1-202ENST00000347617 FBXW4P57775 412 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms