RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 ONECUT2O95948 504 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 FGF5P12034 268 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 C1orf189Q5VU69 101 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 TMEM123Q8N131 208 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 OR11L1Q8NGX0 322 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 NPRL2Q8WTW4 380 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 C10orf35Q96D05 121 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 ZNF845Q96IR2 970 aaPredicted RBP13.58□□□□□ -0.24
LRP8-202ENST00000347547 FAAP24Q9BTP7 215 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 LRFN1Q9P244 771 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 B3GAT1Q9P2W7 334 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 ARID1AO14497 2285 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 C3orf85A0A1B0GTC6 90 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 LIPT2A6NK58 231 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 SSSCA1O60232 199 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 DHRS3O75911 302 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 MDKP21741 143 aaPredicted RBP13.58□□□□□ -0.24
LRP8-202ENST00000347547 HNRNPA2B1P22626 353 aaKnown RBP13.58□□□□□ -0.24
LRP8-202ENST00000347547 RRADP55042 308 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 FAM3BP58499 235 aaPredicted RBP13.58□□□□□ -0.24
LRP8-202ENST00000347547 YPEL5P62699 121 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 TEX38Q6PEX7 206 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 SLC25A47Q6Q0C1 308 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 LIN37Q96GY3 246 aaPredicted RBP13.58□□□□□ -0.24
LRP8-202ENST00000347547 WWTR1Q9GZV5 400 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 IGFLR1Q9H665 355 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 ELL3Q9HB65 397 aaPredicted RBP13.58□□□□□ -0.24
LRP8-202ENST00000347547 GAB2Q9UQC2 676 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 VDAC3Q9Y277 283 aa13.58□□□□□ -0.24
LRP8-202ENST00000347547 DUXBA0A1W2PPF3 345 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 ANKUB1A6NFN9 424 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 E9PLN8 166 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 RER1O15258 196 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 CTSEP14091 401 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 OPRM1P35372 400 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 KIR2DL1P43626 348 aaPredicted RBP13.57□□□□□ -0.24
LRP8-202ENST00000347547 CLRN1P58418 232 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 PRDX4Q13162 271 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 PMS2P11Q13670 270 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 P2RY6Q15077 328 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 WDR25Q64LD2 544 aaPredicted RBP13.57□□□□□ -0.24
LRP8-202ENST00000347547 CPEB2Q7Z5Q1 589 aaKnown RBP13.57□□□□□ -0.24
LRP8-202ENST00000347547 IL22RA1Q8N6P7 574 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 DDIT4LQ96D03 193 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 CBLN4Q9NTU7 201 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 B4E171 279 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 MPPED1O15442 326 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 GLI4P10075 376 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 TSPAN7P41732 249 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 ID3Q02535 119 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 CLN3Q13286 438 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 HERPUD1Q15011 391 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 ACOT6Q3I5F7 207 aaPredicted RBP13.57□□□□□ -0.24
LRP8-202ENST00000347547 MEX3BQ6ZN04 569 aaKnown RBP13.57□□□□□ -0.24
LRP8-202ENST00000347547 YAF2Q8IY57 180 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 ZNF441Q8N8Z8 693 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 OR51G1Q8NGK1 321 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 OR2V1Q8NHB1 315 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 OR10J5Q8NHC4 309 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 PGAM5Q96HS1 289 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 FBRSQ9HAH7 460 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 CLEC1BQ9P126 229 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 NAT8Q9UHE5 227 aa13.57□□□□□ -0.24
LRP8-202ENST00000347547 COL5A1P20908 1838 aaPredicted RBP13.56□□□□□ -0.24
LRP8-202ENST00000347547 TOX3O15405 576 aaPredicted RBP13.56□□□□□ -0.24
LRP8-202ENST00000347547 CST7O76096 145 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 IGHG1P01857 330 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 RPLP1P05386 114 aaKnown RBP13.56□□□□□ -0.24
LRP8-202ENST00000347547 EXT1Q16394 746 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 ZNF787Q6DD87 383 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 ZNF66Q6ZN08 573 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 ZNF573Q86YE8 665 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 LAMP3Q9UQV4 416 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 TMEM50AO95807 157 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 TNFP01375 233 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 CDAP32320 146 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 NPBWR2P48146 333 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 HHEXQ03014 270 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 SMAD4Q13485 552 aaKnown RBP13.56□□□□□ -0.24
LRP8-202ENST00000347547 NKAIN1Q4KMZ8 207 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 TMEM196Q5HYL7 178 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 DMRTC1Q5HYR2 192 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 ACTL10Q5JWF8 245 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 CYP2G1PQ6ZSU1 146 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 ADPRHL1Q8NDY3 354 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 ZNF286AQ9HBT8 521 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 GPR173Q9NS66 373 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 RNF150Q9ULK6 438 aa13.56□□□□□ -0.24
LRP8-202ENST00000347547 MRPS18CQ9Y3D5 142 aaKnown RBP13.56□□□□□ -0.24
LRP8-202ENST00000347547 LRP4O75096 1905 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 C5orf63A6NC05 138 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 CD55P08174 381 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 SUMO3P55854 103 aaPredicted RBP13.55□□□□□ -0.24
LRP8-202ENST00000347547 HERV-K104P61576 105 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 OR8B8Q15620 311 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 MPV17LQ2QL34 196 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
LRP8-202ENST00000347547 C16orf82Q7Z2V1 217 aa13.55□□□□□ -0.24
LRP8-202ENST00000347547 MRGPRGQ86SM5 289 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms