RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 NAGKQ9UJ70 344 aa11.87□□□□□ -0.51
COL6A3-202ENST00000347401 KHDC1LQ5JSQ8 128 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 ARHGAP5-AS1Q96IT6 56 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 PRO1933Q9H354 126 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 CA3P07451 260 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 CAPZBP47756 277 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 COMPP49747 757 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-202ENST00000347401 P4HTMQ9NXG6 502 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 CACNA1HO95180 2353 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 LCTP09848 1927 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 LILRA5A6NI73 299 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 PPM1DO15297 605 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 LSM6P62312 80 aaKnown RBP11.86□□□□□ -0.51
COL6A3-202ENST00000347401 ZNF770Q6IQ21 691 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-202ENST00000347401 TMEM183AQ8IXX5 376 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 LINC00052Q96N35 136 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 MARCH5Q9NX47 278 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 SIRPB1O00241 398 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 ARSAP15289 507 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 RAB32Q13637 225 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 GAMTQ14353 236 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 ABHD1Q96SE0 405 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 MYOZ1Q9NP98 299 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-202ENST00000347401 IL19Q9UHD0 177 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 PAM16Q9Y3D7 125 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 KCNE1BA0A087WTH5 132 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 A8MWL6 223 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 CCR2P41597 374 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 DYNLT3P51808 116 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 ERV3-1Q14264 604 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 ASCL5Q7RTU5 278 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 SCN10AQ9Y5Y9 1956 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 OOEPA6NGQ2 149 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 HSPB1P04792 205 aaKnown RBP11.86□□□□□ -0.51
COL6A3-202ENST00000347401 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
COL6A3-202ENST00000347401 MLF2Q15773 248 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-202ENST00000347401 CDKN3Q16667 212 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 PAQR9Q6ZVX9 377 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 BHLHE23Q8NDY6 225 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 OR13G1Q8NGZ3 307 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 SPACA9Q96E40 222 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-202ENST00000347401 A0A1W2PPC4 97 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 B4GALT3O60512 393 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 ERVFRD-1P60508 538 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 MICBQ29980 383 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 DTD1Q8TEA8 209 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 IER2Q9BTL4 223 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 PROCRQ9UNN8 238 aa11.86□□□□□ -0.51
COL6A3-202ENST00000347401 LIPFP07098 398 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 PMP22Q01453 160 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 SLC37A2Q8TED4 501 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 MPC1Q9Y5U8 109 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 IDSB3KWA1 339 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 HPXP02790 462 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 TMEM190Q8WZ59 177 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 C4orf45Q96LM5 186 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 MOGAT1Q96PD6 335 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 DIRC2Q96SL1 478 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 PRRG2O14669 202 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 ICOSLGO75144 302 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 IL2RAP01589 272 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 ADIPOQQ15848 244 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 SLC16A13Q7RTY0 426 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 OR1L6Q8NGR2 347 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 PRNDQ9UKY0 176 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 BCL2P10415 239 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 EIF3IQ13347 325 aaKnown RBP11.85□□□□□ -0.51
COL6A3-202ENST00000347401 WDFY1Q8IWB7 410 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 RBM14Q96PK6 669 aaKnown RBP11.85□□□□□ -0.51
COL6A3-202ENST00000347401 ICAM5Q9UMF0 924 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 MLF1P58340 268 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 UBE2L3P68036 154 aaKnown RBP11.85□□□□□ -0.51
COL6A3-202ENST00000347401 C19orf24Q9BVV8 132 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 LIPGQ9Y5X9 500 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 RAB9AP51151 201 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 TMEM267Q0VDI3 215 aaPredicted RBP11.85□□□□□ -0.51
COL6A3-202ENST00000347401 MBNL1Q9NR56 388 aaKnown RBP11.85□□□□□ -0.51
COL6A3-202ENST00000347401 SYNGR2O43760 224 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 COL8A1P27658 744 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 CEACAM6P40199 344 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 TIAL1Q01085 375 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL6A3-202ENST00000347401 OR10V1Q8NGI7 309 aa11.85□□□□□ -0.51
COL6A3-202ENST00000347401 PI3P19957 117 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 C5orf17Q8NAS9 161 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 SLC52A3Q9NQ40 469 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 V9GYH0 126 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 MED12LQ86YW9 2145 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 NPBWR2P48146 333 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 C11orf68Q9H3H3 251 aaKnown RBP11.84□□□□□ -0.51
COL6A3-202ENST00000347401 GLRX2Q9NS18 164 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 POU2F2P09086 479 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 FAHP16930 419 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 ZNF816Q0VGE8 651 aaPredicted RBP11.84□□□□□ -0.51
COL6A3-202ENST00000347401 PEF1Q9UBV8 284 aaKnown RBP11.84□□□□□ -0.51
COL6A3-202ENST00000347401 hADV38S2A0JD32 116 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 OGG1O15527 345 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 OR1D5P58170 312 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 SMUG1Q53HV7 270 aa11.84□□□□□ -0.51
COL6A3-202ENST00000347401 RGS7BPQ6MZT1 257 aaPredicted RBP11.84□□□□□ -0.51
COL6A3-202ENST00000347401 TNFSF18Q9UNG2 199 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms