RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 SHPRHQ149N8 1683 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 RBMY1BA6NDE4 496 aaKnown RBP6.5□□□□□ -1.37
KNL1-201ENST00000346991 RBMY1EA6NEQ0 496 aaKnown RBP6.5□□□□□ -1.37
KNL1-201ENST00000346991 RBMY1DP0C7P1 496 aaKnown RBP6.5□□□□□ -1.37
KNL1-201ENST00000346991 RBMY1A1P0DJD3 496 aaKnown RBP6.5□□□□□ -1.37
KNL1-201ENST00000346991 RBMY1CP0DJD4 496 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 FOXA1P55317 472 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 ZNF683Q8IZ20 524 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 TMEM140Q9NV12 185 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 B4DEV8 164 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 CLDN34H7C241 214 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 CXorf1O96002 111 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 DIO1P49895 249 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 PCBP3P57721 371 aaKnown RBP6.5□□□□□ -1.37
KNL1-201ENST00000346991 DPTQ07507 201 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 FAM209AQ5JX71 171 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 LIAT1Q6ZQX7 453 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 C12orf57Q99622 126 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 Q9N2K0 584 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 DNAJB12Q9NXW2 375 aaKnown RBP6.5□□□□□ -1.37
KNL1-201ENST00000346991 SSC5DA1L4H1 1573 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 FAM221AA4D161 298 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 GJB3O75712 270 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 DXOO77932 396 aaKnown RBP6.5□□□□□ -1.37
KNL1-201ENST00000346991 DAPP51397 102 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 RPS20P60866 119 aaKnown RBP6.5□□□□□ -1.37
KNL1-201ENST00000346991 SMUG1Q53HV7 270 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 C17orf99Q6UX52 265 aa6.5□□□□□ -1.37
KNL1-201ENST00000346991 C17orf51A8MQB3 221 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 CSN3P07498 182 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 SLC16A11Q8NCK7 471 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 SDF2Q99470 211 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 ZNF768Q9H5H4 540 aaKnown RBP6.49□□□□□ -1.37
KNL1-201ENST00000346991 TMEM262E9PQX1 116 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 H7C1H1 209 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 DHHO43323 396 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 HOXD4P09016 255 aaPredicted RBP6.49□□□□□ -1.37
KNL1-201ENST00000346991 CA6P23280 308 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 STARD6P59095 220 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 TRIP6Q15654 476 aaKnown RBP6.49□□□□□ -1.37
KNL1-201ENST00000346991 HES3Q5TGS1 186 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 C8orf44Q96CB5 159 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 ZNF778Q96MU6 729 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 FZR1Q9UM11 496 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 IFITM5A6NNB3 132 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 MBTPS2O43462 519 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 GLI4P10075 376 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 IL13RA2Q14627 380 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 DTX2Q86UW9 622 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 OR1L8Q8NGR8 309 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 SPPL3Q8TCT6 385 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 PPP1R1CQ8WVI7 109 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 TMEM37Q8WXS4 190 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 MCHR2Q969V1 340 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 ADAT3Q96EY9 351 aaPredicted RBP6.49□□□□□ -1.37
KNL1-201ENST00000346991 VGLL1Q99990 258 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 SF3B6Q9Y3B4 125 aaKnown RBP6.49□□□□□ -1.37
KNL1-201ENST00000346991 TRAV34A0A0B4J273 112 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 C7orf72A4D263 438 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 C3orf80F5H4A9 247 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 CST4P01036 141 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 CCL7P80098 99 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 OR10G4Q8NGN3 311 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 OR10G9Q8NGN4 311 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 OR10G7Q8NGN6 311 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 C4orf45Q96LM5 186 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 NIPSNAP1Q9BPW8 284 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 RER1O15258 196 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 COMPP49747 757 aaPredicted RBP6.49□□□□□ -1.37
KNL1-201ENST00000346991 HMGA2P52926 109 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 SLC37A1P57057 533 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 CXorf66Q5JRM2 361 aaPredicted RBP6.49□□□□□ -1.37
KNL1-201ENST00000346991 OR10G8Q8NGN5 311 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 PTPMT1Q8WUK0 201 aaPredicted RBP6.49□□□□□ -1.37
KNL1-201ENST00000346991 DUX5Q96PT3 197 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 TRAV1-2A0A0B4J238 106 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 CST7O76096 145 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 CA2P00918 260 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 PYCR3Q53H96 274 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 LINC00299Q6ZSB3 139 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 OR2W1Q9Y3N9 320 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 WSB1Q9Y6I7 421 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 KCPQ6ZWJ8 1503 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 DEFB108AA8MXU0 73 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 PRDX2P32119 198 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 SNRPNP63162 240 aaKnown RBP6.49□□□□□ -1.37
KNL1-201ENST00000346991 HLA-DRB5Q30154 266 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 OR5C1Q8NGR4 320 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 OR13C6PQ8NH95 151 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 MPC1Q9Y5U8 109 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 MTCH2Q9Y6C9 303 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 MPDZO75970 2070 aa6.49□□□□□ -1.37
KNL1-201ENST00000346991 GAGE10A6NGK3 116 aa6.48□□□□□ -1.37
KNL1-201ENST00000346991 UPK1AO00322 258 aa6.48□□□□□ -1.37
KNL1-201ENST00000346991 TNFSF14O43557 240 aa6.48□□□□□ -1.37
KNL1-201ENST00000346991 TM4SF4P48230 202 aa6.48□□□□□ -1.37
KNL1-201ENST00000346991 TMPRSS3P57727 454 aa6.48□□□□□ -1.37
KNL1-201ENST00000346991 NANOGP1Q8N7R0 232 aa6.48□□□□□ -1.37
KNL1-201ENST00000346991 OR2D3Q8NGH3 330 aa6.48□□□□□ -1.37
KNL1-201ENST00000346991 KIR2DL4Q99706 377 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms