RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 RPS23P62266 143 aaKnown RBP15.41■□□□□ 0.06
SPAST-202ENST00000345662 C1QL3Q5VWW1 255 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 HIST1H2BAQ96A08 127 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 PAGE4O60829 102 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 FCGR3BO75015 233 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 GAPTQ8N292 157 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 OR5D13Q8NGL4 314 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 ESRP2Q9H6T0 727 aaKnown RBP15.41■□□□□ 0.06
SPAST-202ENST00000345662 SH2D2AQ9NP31 389 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 NPDC1Q9NQX5 325 aaPredicted RBP15.41■□□□□ 0.06
SPAST-202ENST00000345662 A0A1W2PPC1 479 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 CRYM-AS1A6NIL9 109 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 ZNF32P17041 273 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 MDKP21741 143 aaPredicted RBP15.41■□□□□ 0.06
SPAST-202ENST00000345662 MMP16P51512 607 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 PAFAH1B2P68402 229 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 DEFB108BQ8NET1 73 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 ADAMTS17Q8TE56 1095 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 C10orf35Q96D05 121 aa15.41■□□□□ 0.06
SPAST-202ENST00000345662 RPL13AP40429 203 aaKnown RBP15.4■□□□□ 0.06
SPAST-202ENST00000345662 TMEM97Q5BJF2 176 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 CST9Q5W186 159 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 ZAR1Q86SH2 424 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 PRSS27Q9BQR3 290 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 EGLN1Q9GZT9 426 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 SPTY2D1-AS1A0A0U1RR47 76 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 A0A1W2PPC4 97 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 A8MXK9 166 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 SEMA7AO75326 666 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 DEDDO75618 318 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 SLC25A5P05141 298 aaKnown RBP15.4■□□□□ 0.06
SPAST-202ENST00000345662 KIR3DL2P43630 455 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 TMEM167BQ9NRX6 74 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 DOK5Q9P104 306 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 NAGKQ9UJ70 344 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 HSPB1P04792 205 aaKnown RBP15.4■□□□□ 0.06
SPAST-202ENST00000345662 ZNF718Q3SXZ3 478 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 OR6X1Q8NH79 312 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 RNF133Q8WVZ7 376 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 AQP10Q96PS8 301 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 NRTNQ99748 197 aa15.4■□□□□ 0.06
SPAST-202ENST00000345662 CTXND1A0A1B0GTU2 59 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 DIRC3C9JPN6 131 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 SPATA46Q5T0L3 261 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 GGACTQ9BVM4 153 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 GPR61Q9BZJ8 451 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 OR2D2Q9H210 308 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 SNURFLB1AK76 121 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 TCL1AP56279 114 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 OR1A1Q9P1Q5 309 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 KCNK7Q9Y2U2 307 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 KLHDC2Q9Y2U9 406 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 TRBV5-5A0A0J9YX44 114 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 A0A1B0GV90 55 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 GLB1P16278 677 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 OR1P1Q8NH06 330 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 ZPLD1Q8TCW7 415 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 SIAH2O43255 324 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 ZNF207O43670 478 aaKnown RBP15.39■□□□□ 0.05
SPAST-202ENST00000345662 CXCL10P02778 98 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 VEGFBP49765 207 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 PPOXP50336 477 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 BOD1Q96IK1 185 aa15.39■□□□□ 0.05
SPAST-202ENST00000345662 SPINK9Q5DT21 86 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 ZNF738Q8NE65 137 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 ABCA3Q99758 1704 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 IER3P46695 156 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 ANKRD33Q7Z3H0 272 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 REC114Q7Z4M0 266 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 SERGEFQ9UGK8 458 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 PSG11Q9UQ72 335 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 CXorf65A6NEN9 183 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 SCGB1C2P0DMR2 95 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 FSTP19883 344 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 ADAT3Q96EY9 351 aaPredicted RBP15.38■□□□□ 0.05
SPAST-202ENST00000345662 SRD5A3Q9H8P0 318 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 GPR132Q9UNW8 380 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 ZNF205O95201 554 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 CISD3P0C7P0 127 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 F2RP25116 425 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 PCP4P48539 62 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 CPEB3Q8NE35 698 aaKnown RBP15.38■□□□□ 0.05
SPAST-202ENST00000345662 LPAR5Q9H1C0 372 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 CCL28Q9NRJ3 127 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 USP54Q70EL1 1684 aa15.38■□□□□ 0.05
SPAST-202ENST00000345662 FOCADQ5VW36 1801 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 A0A1B0GU03 582 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 C1QL1O75973 258 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 LGALS4P56470 323 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 TMEM211Q6ICI0 200 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 COL16A1Q07092 1604 aaPredicted RBP15.37■□□□□ 0.05
SPAST-202ENST00000345662 BRWD1Q9NSI6 2320 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 LOC102724200A0A096LPH7 203 aaPredicted RBP15.37■□□□□ 0.05
SPAST-202ENST00000345662 NPIPB9F8W1W9 429 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 ST8SIA5O15466 376 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 TMEM50BP56557 158 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 TMEM251Q8N6I4 163 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 LINC00469Q8N7U9 141 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 TREM2Q9NZC2 230 aa15.37■□□□□ 0.05
SPAST-202ENST00000345662 SCN9AQ15858 1988 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms