RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 SLC22A1O15245 554 aa17.15■□□□□ 0.34
SMARCB1-202ENST00000344921 JUNBP17275 347 aaPredicted RBP17.15■□□□□ 0.34
SMARCB1-202ENST00000344921 RAB3BP20337 219 aa17.15■□□□□ 0.34
SMARCB1-202ENST00000344921 ATAD3CQ5T2N8 411 aa17.15■□□□□ 0.34
SMARCB1-202ENST00000344921 TMEM200BQ69YZ2 307 aa17.15■□□□□ 0.34
SMARCB1-202ENST00000344921 LINC00596Q86U02 117 aa17.15■□□□□ 0.34
SMARCB1-202ENST00000344921 TMEM104Q8NE00 496 aa17.15■□□□□ 0.34
SMARCB1-202ENST00000344921 SHISA3A0PJX4 238 aa17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 MEX3AA1L020 520 aaKnown RBP17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 MPIG6BO95866 241 aa17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 ARSBP15848 533 aa17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 P2RY14Q15391 338 aa17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 RAB11BQ15907 218 aa17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 TIMM50Q3ZCQ8 353 aa17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 METAP1DQ6UB28 335 aaPredicted RBP17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 UPRTQ96BW1 309 aa17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 KCTD7Q96MP8 289 aa17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 SIRPDQ9H106 197 aa17.14■□□□□ 0.33
SMARCB1-202ENST00000344921 IGHV3OR16-10A0A075B7F0 116 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 TRAV40A0A0B4J280 105 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 FUOMA2VDF0 154 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 SMIM18P0DKX4 95 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 CD37P11049 281 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 HOXB4P17483 251 aaPredicted RBP17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 RANBP1P43487 201 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 OR10A3P58181 314 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 AESQ08117 197 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 SCGB2A2Q13296 93 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 ATXN7L3Q14CW9 347 aaPredicted RBP17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 MPV17LQ2QL34 196 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 HES5Q5TA89 166 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 OR10K2Q6IF99 312 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 VMO1Q7Z5L0 202 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 BPIFB2Q8N4F0 458 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 KIR3DL3Q8N743 410 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 KCNG3Q8TAE7 436 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 TRAV24A0A0B4J272 114 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 SMIM30A4D0T7 59 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 BPNT1O95861 308 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 VSIG8P0DPA2 414 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 MMP9P14780 707 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 CLDN12P56749 244 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 KRBOX4Q5JUW0 171 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 TRAPPC6BQ86SZ2 158 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 SUMF2Q8NBJ7 301 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 NEK7Q8TDX7 302 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 MRPS26Q9BYN8 205 aaKnown RBP17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 KCNK15Q9H427 330 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 SIRT7Q9NRC8 400 aa17.13■□□□□ 0.33
SMARCB1-202ENST00000344921 hADV38S2A0JD32 116 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 M0R1W7 72 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 MEF2CQ06413 473 aaPredicted RBP17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 ZNF273Q14593 569 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 GPR157Q5UAW9 335 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 LHX4Q969G2 390 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 SLC25A28Q96A46 364 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 POM121Q96HA1 1249 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 TBX15Q96SF7 602 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 DPCDQ9BVM2 203 aaPredicted RBP17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 TMEM59Q9BXS4 323 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 BARHL1Q9BZE3 327 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 RNF167Q9H6Y7 350 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 ZNF581Q9P0T4 197 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 STEAP1Q9UHE8 339 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 SCOCQ9UIL1 159 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 NUP50Q9UKX7 468 aa17.12■□□□□ 0.33
SMARCB1-202ENST00000344921 hCG_1809904A0A1W2PP81 198 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 A0A1W2PPE2 198 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 A0A1W2PR64 198 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 A0A1W2PRV1 198 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 AIREO43918 545 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 CSN2P05814 226 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 IGHV4-38-2P0DP08 117 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 CCL3L1P16619 93 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 EPHA1P21709 976 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 ERP29P30040 261 aaKnown RBP17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 P2RX3P56373 397 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 KLF17Q5JT82 389 aaPredicted RBP17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 TPRA1Q86W33 373 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 PDZD9Q8IXQ8 264 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 OR51D1Q8NGF3 324 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 C22orf15Q8WYQ4 148 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 YIPF6Q96EC8 236 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 CENPOQ9BU64 300 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 OCEL1Q9H607 264 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 IFT22Q9H7X7 185 aa17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 METTL8Q9H825 291 aaKnown RBP17.11■□□□□ 0.33
SMARCB1-202ENST00000344921 IFITM5A6NNB3 132 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 IFNA2P01563 188 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 GLIPR1P48060 266 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 RIPPLY3P57055 190 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 MXD1Q05195 221 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 BRICD5Q6PL45 260 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 GDPGP1Q6ZNW5 385 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 Q8N7P7 452 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 FAM3DQ96BQ1 224 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 Q96M66 194 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 MS4A7Q9GZW8 240 aaPredicted RBP17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 SPACA1Q9HBV2 294 aa17.1■□□□□ 0.33
SMARCB1-202ENST00000344921 NF1P21359 2839 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms