RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PELI1Q96FA3 418 aa8.54□□□□□ -1.04
TPM3-207ENST00000341372 MRPL48Q96GC5 212 aaKnown RBP8.54□□□□□ -1.04
TPM3-207ENST00000341372 TSC22D3Q99576 134 aa8.54□□□□□ -1.04
TPM3-207ENST00000341372 TMEM246Q9BRR3 403 aa8.54□□□□□ -1.04
TPM3-207ENST00000341372 ALG8Q9BVK2 526 aa8.54□□□□□ -1.04
TPM3-207ENST00000341372 KCNK15Q9H427 330 aa8.54□□□□□ -1.04
TPM3-207ENST00000341372 HIF1ANQ9NWT6 349 aa8.54□□□□□ -1.04
TPM3-207ENST00000341372 PIGLQ9Y2B2 252 aa8.54□□□□□ -1.04
TPM3-207ENST00000341372 LSM4Q9Y4Z0 139 aaKnown RBP8.54□□□□□ -1.04
TPM3-207ENST00000341372 F8WDY8 70 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 P2RY10O00398 339 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 TNFRSF13BO14836 293 aaPredicted RBP8.53□□□□□ -1.04
TPM3-207ENST00000341372 FOXH1O75593 365 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 ISG15P05161 165 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 WNT2P09544 360 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 GATA3P23771 443 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 ETV1P50549 477 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 NANOS3P60323 173 aaKnown RBP8.53□□□□□ -1.04
TPM3-207ENST00000341372 SPCS2Q15005 226 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 RNLSQ5VYX0 342 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 DCDC5Q6ZRR9 648 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 ZNF826PQ6ZT77 177 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 NOXA1Q86UR1 476 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 HAPLN4Q86UW8 402 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 ZNF485Q8NCK3 441 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 OR5A2Q8NGI9 324 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 OR10Z1Q8NGY1 313 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 RPL3LQ92901 407 aaKnown RBP8.53□□□□□ -1.04
TPM3-207ENST00000341372 C10orf35Q96D05 121 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 C4orf36Q96KX1 117 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 SHARPINQ9H0F6 387 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 VCX3AQ9NNX9 186 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 MIOXQ9UGB7 285 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 SVEP1Q4LDE5 3571 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 LOC107986453A0A1B0GWG9 222 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 IRGMA1A4Y4 181 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 SRRM5B3KS81 715 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.53□□□□□ -1.04
TPM3-207ENST00000341372 GABARAPO95166 117 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 FAM157CP0CG43 387 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 LIMS3P0CW19 117 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 LIMS4P0CW20 117 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 ZFP36P26651 326 aaKnown RBP8.53□□□□□ -1.04
TPM3-207ENST00000341372 PSMB9P28065 219 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 TGFBR1P36897 503 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 SEC61A1P61619 476 aaKnown RBP8.53□□□□□ -1.04
TPM3-207ENST00000341372 GNG3P63215 75 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 HOXA4Q00056 320 aaPredicted RBP8.53□□□□□ -1.04
TPM3-207ENST00000341372 SSX1Q16384 188 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 CLVS2Q5SYC1 327 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 NANOGP1Q8N7R0 232 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 HAVCR2Q8TDQ0 301 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 TMEM80Q96HE8 168 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 RNF170Q96K19 258 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 SRD5A3Q9H8P0 318 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 LPAR2Q9HBW0 351 aa8.53□□□□□ -1.04
TPM3-207ENST00000341372 DIMT1Q9UNQ2 313 aaKnown RBP8.53□□□□□ -1.04
TPM3-207ENST00000341372 MXRA5Q9NR99 2828 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 TRAV38-1A0A0B4J264 116 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 A0A1B0GVI7 797 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 OR4C45A6NMZ5 311 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 SYT7O43581 403 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 NRASP01111 189 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 ZNF12P17014 697 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 HNF1AP20823 631 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 CD80P33681 288 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 SCGB2A2Q13296 93 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 KCNJ8Q15842 424 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 TMEM244Q5VVB8 128 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 LHFPL3Q86UP9 236 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 SCCPDHQ8NBX0 429 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 LRRC29Q8WV35 223 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 SLC25A28Q96A46 364 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 DACT3Q96B18 629 aaPredicted RBP8.52□□□□□ -1.05
TPM3-207ENST00000341372 OPALINQ96PE5 141 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 OR51I2Q9H344 312 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 METTL17Q9H7H0 456 aaPredicted RBP8.52□□□□□ -1.05
TPM3-207ENST00000341372 MGAT4CQ9UBM8 478 aa8.52□□□□□ -1.05
TPM3-207ENST00000341372 A0A0G2JMP0 313 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 A0A0X1KG70 313 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 XKRY2A2RUG3 117 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 J3QLI3 93 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 J3QLW9 94 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 CDIPTO14735 213 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 NDUFA2O43678 99 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 MUC1P15941 1255 aaPredicted RBP8.51□□□□□ -1.05
TPM3-207ENST00000341372 ZNF19P17023 458 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 DUSP1P28562 367 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 TGM4P49221 684 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 GPM6AP51674 278 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 PAX2Q02962 417 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 ESCO2Q56NI9 601 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 CEP78Q5JTW2 689 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 PLCXD3Q63HM9 321 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 ZNF841Q6ZN19 808 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 PRIMA1Q86XR5 153 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 OR4M2Q8NGB6 313 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 OR8B3Q8NGG8 313 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 RPS4Y2Q8TD47 263 aa8.51□□□□□ -1.05
TPM3-207ENST00000341372 RAB2BQ8WUD1 216 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms