RNA–Protein interactions for RNA: ENST00000339859.8

USP54-201, Transcript of ubiquitin specific peptidase 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP54, Length 6,247 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-201ENST00000339859 SULT1A3P0DMM9 295 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 SULT1A4P0DMN0 295 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 FSTP19883 344 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 GUCA2AQ02747 115 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 KCNMB1Q16558 191 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 SPAG16Q8N0X2 631 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 MARCH1Q8TCQ1 289 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 SMIM4Q8WVI0 70 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 ARPC5LQ9BPX5 153 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 ST6GALNAC2Q9UJ37 374 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 A8MXE2 369 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 SEMA7AO75326 666 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 DCAF12L2Q5VW00 463 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 OR10P1Q8NGE3 313 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 OR4A4PQ8NGN8 299 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 UBALD1Q8TB05 177 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 TAS2R3Q9NYW6 316 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 FAM106CPP0CH98 169 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 TMEM30BQ3MIR4 351 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 MOB3AQ96BX8 217 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 MARS2Q96GW9 593 aaKnown RBP8.77□□□□□ -1.01
USP54-201ENST00000339859 NPAP1Q9NZP6 1156 aa8.77□□□□□ -1.01
USP54-201ENST00000339859 PPIAL4CA0A0B4J2A2 164 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 A0A1W2PN81 502 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 PPIAL4GP0DN37 164 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 CHRNA7P36544 502 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 LPAR6P43657 344 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 MFSD4AQ8N468 514 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM206AQ9NX38 181 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 PLEKHB1Q9UF11 243 aaPredicted RBP8.76□□□□□ -1.01
USP54-201ENST00000339859 LOC390937A0A1W2PQ73 354 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A10PA6NDY2 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A18PA6NE21 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A16PA6NEW6 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A20PA6NIJ5 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A8PA6NJQ4 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A7PA6NKC0 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A22PA8MWA6 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A12PA8MX19 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A5PA8MXJ8 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A23PA8MXZ1 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 RAMP1O60894 148 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A15PP0C7V4 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A13PP0C7W8 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A14PP0C7W9 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 FAM90A24PP0C7X0 464 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 AESQ08117 197 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 SSX1Q16384 188 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 PDZD9Q8IXQ8 264 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 OR13C8Q8NGS7 320 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 CMTM2Q8TAZ6 248 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 HPSE2Q8WWQ2 592 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 TMEM106BQ9NUM4 274 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 IL36GQ9NZH8 169 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 ACKR3P25106 362 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 PIGYQ3MUY2 71 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 OR5H6Q8NGV6 325 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 SEBOXQ9HB31 216 aaPredicted RBP8.76□□□□□ -1.01
USP54-201ENST00000339859 ZIC2O95409 532 aaPredicted RBP8.76□□□□□ -1.01
USP54-201ENST00000339859 CSN1S1P47710 185 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 TAGLNQ01995 201 aaKnown RBP8.76□□□□□ -1.01
USP54-201ENST00000339859 ASAH1Q13510 395 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 LYG2Q86SG7 212 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 TMEM217Q8N7C4 229 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 ZBTB34Q8NCN2 500 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 PXT1Q8NFP0 134 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 DAZAP1Q96EP5 407 aaKnown RBP8.76□□□□□ -1.01
USP54-201ENST00000339859 ADGRG7Q96K78 797 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 TAF9BQ9HBM6 251 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 PSENENQ9NZ42 101 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 SLC35B1P78383 322 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 TNXAQ16473 311 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 ELP2Q6IA86 826 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 ZDHHC22Q8N966 263 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 OR10AC1Q8NH08 325 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 SEC22AQ96IW7 307 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 MEGF10Q96KG7 1140 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 OR5B12Q96R08 314 aa8.76□□□□□ -1.01
USP54-201ENST00000339859 RALYQ9UKM9 306 aaKnown RBP8.76□□□□□ -1.01
USP54-201ENST00000339859 IGKV3D-15A0A087WSY6 115 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 A0A0G2JNJ9 132 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 A0A1B0GV50 99 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 MBD3L4A6NDZ8 208 aaPredicted RBP8.75□□□□□ -1.01
USP54-201ENST00000339859 MBD3L3A6NE82 208 aaPredicted RBP8.75□□□□□ -1.01
USP54-201ENST00000339859 MBD3L5A6NJ08 208 aaPredicted RBP8.75□□□□□ -1.01
USP54-201ENST00000339859 F6UZH7 168 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 GAPDHP04406 335 aaKnown RBP8.75□□□□□ -1.01
USP54-201ENST00000339859 LIPFP07098 398 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 DTYMKP23919 212 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 PTGDSP41222 190 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 FAM122BQ7Z309 247 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 OR5AP2Q8NGF4 316 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 MBD3L2Q8NHZ7 208 aaPredicted RBP8.75□□□□□ -1.01
USP54-201ENST00000339859 GRAMD2BQ96HH9 432 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 MESP1Q9BRJ9 268 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 Q9UFV3 132 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 RPH3ALQ9UNE2 315 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 K7N7A8 449 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 CLEC3BP05452 202 aa8.75□□□□□ -1.01
USP54-201ENST00000339859 MAGEB1P43366 347 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms