RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ERGIC3Q9Y282 383 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 LINC00312Q9Y6C7 94 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 TRAV24A0A0B4J272 114 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 hADV38S2A0JD32 116 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 ATP6V1G2O95670 118 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 IGHV1-8P0DP01 117 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 ZNF44P15621 663 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 OMGP23515 440 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 ZNF93P35789 620 aaPredicted RBP12.4□□□□□ -0.42
PRKN-201ENST00000338468 GLIPR1P48060 266 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 BDH1Q02338 343 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 SCN1BQ07699 218 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 AESQ08117 197 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 FOXL1Q12952 345 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 RIPK1Q13546 671 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 INSL4Q14641 139 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 PIGYQ3MUY2 71 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 LDLRAD2Q5SZI1 272 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 SHISA2Q6UWI4 295 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 LYPD6Q86Y78 171 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 MYDGFQ969H8 173 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 CPNE2Q96FN4 548 aaPredicted RBP12.4□□□□□ -0.42
PRKN-201ENST00000338468 ZNF714Q96N38 554 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 MND1Q9BWT6 205 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 PPA2Q9H2U2 334 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 IL36GQ9NZH8 169 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 C1RLQ9NZP8 487 aa12.4□□□□□ -0.42
PRKN-201ENST00000338468 hCG_1809904A0A1W2PP81 198 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 A0A1W2PPE2 198 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 A0A1W2PR64 198 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 A0A1W2PRV1 198 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 FAM90A8PA6NJQ4 464 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 ODF3BA8MYP8 253 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 H0YHG0 523 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 DEGS1O15121 323 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 GPR137BO60478 399 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 MMP23AO75900 390 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 CSN2P05814 226 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 MDKP21741 143 aaPredicted RBP12.39□□□□□ -0.43
PRKN-201ENST00000338468 TGFBR2P37173 567 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 GP2P55259 537 aaKnown RBP12.39□□□□□ -0.43
PRKN-201ENST00000338468 DEFA6Q01524 100 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 CHST4Q8NCG5 386 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 BEND2Q8NDZ0 799 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 PPP1R35Q8TAP8 253 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 DYRK2Q92630 601 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 NR1H4Q96RI1 486 aaPredicted RBP12.39□□□□□ -0.43
PRKN-201ENST00000338468 ZNF184Q99676 751 aaPredicted RBP12.39□□□□□ -0.43
PRKN-201ENST00000338468 ZNF747Q9BV97 191 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 FAM192AQ9GZU8 254 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 MEGF9Q9H1U4 602 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 VCX3BQ9H321 246 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 DPAGT1Q9H3H5 408 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 SCN3BQ9NY72 215 aa12.39□□□□□ -0.43
PRKN-201ENST00000338468 HTR3BO95264 441 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 PAHP00439 452 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 CRHBPP24387 322 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 IL13RA2Q14627 380 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 RSU1Q15404 277 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 SPHARQ15513 63 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 UNQ9370/PRO34162Q6UXP9 181 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 BAIAP2L2Q6UXY1 529 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 LHFPL4Q7Z7J7 247 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 DYNAPQ8N1N2 210 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 OR11H6Q8NGC7 330 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 CORO2AQ92828 525 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 PPIL3Q9H2H8 161 aaKnown RBP12.38□□□□□ -0.43
PRKN-201ENST00000338468 ING4Q9UNL4 249 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 FOXJ3Q9UPW0 622 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 UBE2J1Q9Y385 318 aaPredicted RBP12.38□□□□□ -0.43
PRKN-201ENST00000338468 TPRKBQ9Y3C4 175 aa12.38□□□□□ -0.43
PRKN-201ENST00000338468 A0A1W2PP11 408 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 ODAMA1E959 279 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 NDUFA7O95182 113 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 GDNFP39905 211 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 HSPA13P48723 471 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 ATXN7L3Q14CW9 347 aaPredicted RBP12.37□□□□□ -0.43
PRKN-201ENST00000338468 NHLRC3Q5JS37 347 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 FAM27D1Q5T7N8 215 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 ZNF626Q68DY1 528 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 METTL9Q9H1A3 318 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 CKLFQ9UBR5 152 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 SESN1Q9Y6P5 492 aa12.37□□□□□ -0.43
PRKN-201ENST00000338468 MEGF11A6BM72 1044 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 HSPB6O14558 160 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 SC5DO75845 299 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 CLPXO76031 633 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 MAS1P04201 325 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 CGB3P0DN86 165 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 CGB7P0DN87 165 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 RAG2P55895 527 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 RBM11P57052 281 aaKnown RBP12.36□□□□□ -0.43
PRKN-201ENST00000338468 RPL15P61313 204 aaKnown RBP12.36□□□□□ -0.43
PRKN-201ENST00000338468 ACSM3Q53FZ2 586 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 KIAA2026Q5HYC2 2103 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 KRBOX4Q5JUW0 171 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 PRAMEF5Q5TYX0 476 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 TRAPPC6BQ86SZ2 158 aa12.36□□□□□ -0.43
PRKN-201ENST00000338468 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms